RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ARVCFO00192 962 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 FGAP02671 866 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 TNFAIP2Q03169 654 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 TMEM63BQ5T3F8 832 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 FAM126BQ8IXS8 530 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 PURBQ96QR8 312 aaKnown RBP22.26■■□□□ 1.15
ABCA3-204ENST00000566200 SPC25Q9HBM1 224 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 MROH7Q68CQ1 1323 aa22.26■■□□□ 1.15
ABCA3-204ENST00000566200 A0A0U1RQG5 324 aaPredicted RBP22.25■■□□□ 1.15
ABCA3-204ENST00000566200 SLC16A2P36021 539 aa22.25■■□□□ 1.15
ABCA3-204ENST00000566200 C16orf59Q7L2K0 433 aa22.25■■□□□ 1.15
ABCA3-204ENST00000566200 ZNF589Q86UQ0 364 aaPredicted RBP22.25■■□□□ 1.15
ABCA3-204ENST00000566200 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.25■■□□□ 1.15
ABCA3-204ENST00000566200 DCAF4Q8WV16 495 aa22.25■■□□□ 1.15
ABCA3-204ENST00000566200 MYLIPQ8WY64 445 aa22.25■■□□□ 1.15
ABCA3-204ENST00000566200 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.25■■□□□ 1.15
ABCA3-204ENST00000566200 RANBP17Q9H2T7 1088 aaKnown RBP22.25■■□□□ 1.15
ABCA3-204ENST00000566200 PDGFCQ9NRA1 345 aa22.25■■□□□ 1.15
ABCA3-204ENST00000566200 ASB14A6NK59 587 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 SMPD1P17405 629 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 MFSD5Q6N075 450 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 TAPT1Q6NXT6 567 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 BTNL9Q6UXG8 535 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 TMEM47Q9BQJ4 181 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 CCPG1Q9ULG6 757 aa22.24■■□□□ 1.15
ABCA3-204ENST00000566200 CD4P01730 458 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 ICAM1P05362 532 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 HSPD1P10809 573 aaKnown RBP22.23■■□□□ 1.15
ABCA3-204ENST00000566200 NMIQ13287 307 aaPredicted RBP22.23■■□□□ 1.15
ABCA3-204ENST00000566200 CCDC96Q2M329 555 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 CXCL17Q6UXB2 119 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 TLK2Q86UE8 772 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 SLC43A3Q8NBI5 491 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 VTI1AQ96AJ9 217 aa22.23■■□□□ 1.15
ABCA3-204ENST00000566200 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
ABCA3-204ENST00000566200 RRP12Q5JTH9 1297 aaKnown RBP22.22■■□□□ 1.15
ABCA3-204ENST00000566200 NSMFQ6X4W1 530 aa22.22■■□□□ 1.15
ABCA3-204ENST00000566200 EEPD1Q7L9B9 569 aa22.22■■□□□ 1.15
ABCA3-204ENST00000566200 FBXO16Q8IX29 292 aaPredicted RBP22.22■■□□□ 1.15
ABCA3-204ENST00000566200 MORC4Q8TE76 937 aa22.22■■□□□ 1.15
ABCA3-204ENST00000566200 COL25A1Q9BXS0 654 aaPredicted RBP22.22■■□□□ 1.15
ABCA3-204ENST00000566200 TCP11L1Q9NUJ3 509 aa22.22■■□□□ 1.15
ABCA3-204ENST00000566200 GRIN2DO15399 1336 aa22.22■■□□□ 1.15
ABCA3-204ENST00000566200 ZMYM6O95789 1325 aa22.22■■□□□ 1.15
ABCA3-204ENST00000566200 NFIBO00712 420 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 TOP1P11387 765 aaKnown RBP22.21■■□□□ 1.15
ABCA3-204ENST00000566200 CSF2RAP15509 400 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 HAND2P61296 217 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 TMEM240Q5SV17 173 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 SYDE2Q5VT97 1194 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 NOL8Q76FK4 1167 aaKnown RBP22.21■■□□□ 1.15
ABCA3-204ENST00000566200 MAFAQ8NHW3 353 aaPredicted RBP22.21■■□□□ 1.15
ABCA3-204ENST00000566200 PPP1R12CQ9BZL4 782 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 LNPKQ9C0E8 428 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 TOMM22Q9NS69 142 aa22.21■■□□□ 1.15
ABCA3-204ENST00000566200 FRMPD2Q68DX3 1309 aaPredicted RBP22.21■■□□□ 1.15
ABCA3-204ENST00000566200 PRUNE2Q8WUY3 3088 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 TMEM265A0A087WTH1 108 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.2■■□□□ 1.14
ABCA3-204ENST00000566200 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.2■■□□□ 1.14
ABCA3-204ENST00000566200 DYNC1LI2O43237 492 aaPredicted RBP22.2■■□□□ 1.14
ABCA3-204ENST00000566200 DNAJB2P25686 324 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 FSCN1Q16658 493 aaKnown RBP22.2■■□□□ 1.14
ABCA3-204ENST00000566200 RASIP1Q5U651 963 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 TICAM2Q86XR7 235 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 TBC1D10CQ8IV04 446 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 LAMA4Q16363 1823 aa22.2■■□□□ 1.14
ABCA3-204ENST00000566200 PDHBP11177 359 aa22.19■■□□□ 1.14
ABCA3-204ENST00000566200 PPIGQ13427 754 aaKnown RBP eCLIP22.19■■□□□ 1.14
ABCA3-204ENST00000566200 BAATQ14032 418 aaPredicted RBP22.19■■□□□ 1.14
ABCA3-204ENST00000566200 IQSEC1Q6DN90 963 aa22.19■■□□□ 1.14
ABCA3-204ENST00000566200 CLEC4DQ8WXI8 215 aa22.19■■□□□ 1.14
ABCA3-204ENST00000566200 CCDC171Q6TFL3 1326 aa22.19■■□□□ 1.14
ABCA3-204ENST00000566200 CUL9Q8IWT3 2517 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 UMODL1Q5DID0 1318 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 TLR3O15455 904 aaKnown RBP22.18■■□□□ 1.14
ABCA3-204ENST00000566200 ACRP10323 421 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 CYP2C18P33260 490 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 ALDH5A1P51649 535 aaPredicted RBP22.18■■□□□ 1.14
ABCA3-204ENST00000566200 GRIN2CQ14957 1233 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 SMC5Q8IY18 1101 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 AP5M1Q9H0R1 490 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 VTA1Q9NP79 307 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 Q9Y3F1 56 aa22.18■■□□□ 1.14
ABCA3-204ENST00000566200 GRXCR1A8MXD5 290 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 CABYRO75952 493 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 SNHG28P0DPA3 235 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 FOSL2P15408 326 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 ITGA7Q13683 1181 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 AKNAD1Q5T1N1 836 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 SLC30A10Q6XR72 485 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 ZNF365Q70YC5 407 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 TMEM199Q8N511 208 aa22.17■■□□□ 1.14
ABCA3-204ENST00000566200 GBF1Q92538 1859 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 VCANP13611 3396 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 TRIM6-TRIM34B2RNG4 842 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 PBX2P40425 430 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 PSMC6P62333 389 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms