RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 FBXO40Q9UH90 709 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 CCPG1Q9ULG6 757 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 PHIPQ8WWQ0 1821 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 CCL15-CCL14A0A0B4J2E2 113 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 VWA5AO00534 786 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 GCLCP48506 637 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-207ENST00000566095 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-207ENST00000566095 CCL15Q16663 113 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 DLK2Q6UY11 383 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 LBX2Q6XYB7 198 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 SAPCD2Q86UD0 394 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 FERMT3Q86UX7 667 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
SF3B3-207ENST00000566095 A0A1W2PQ27 194 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 A0A1W2PQ64 194 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 A0A1W2PQD8 194 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 GOLGA6L4A6NEF3 574 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 SLC25A27O95847 323 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 ZNF445P59923 1031 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 NONOQ15233 471 aaKnown RBP eCLIP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 USH1GQ495M9 461 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 KIAA1755Q5JYT7 1200 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 CST9Q5W186 159 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 RASGRP2Q7LDG7 609 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 AIFM3Q96NN9 605 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 MPHOSPH6Q99547 160 aaKnown RBP11.22□□□□□ -0.61
SF3B3-207ENST00000566095 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 KCNJ14Q9UNX9 436 aa11.22□□□□□ -0.61
SF3B3-207ENST00000566095 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-207ENST00000566095 BTBD18B2RXH4 712 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 B4DLN1 442 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 PIK3CDO00329 1044 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 PPP6R2O75170 966 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 SLC10A3P09131 477 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 GCFC2P16383 781 aaKnown RBP11.21□□□□□ -0.61
SF3B3-207ENST00000566095 DNM1Q05193 864 aaKnown RBP11.21□□□□□ -0.61
SF3B3-207ENST00000566095 MYSM1Q5VVJ2 828 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 CCAR1Q8IX12 1150 aaKnown RBP11.21□□□□□ -0.61
SF3B3-207ENST00000566095 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-207ENST00000566095 COA7Q96BR5 231 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 ATG4CQ96DT6 458 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 SPATA32Q96LK8 384 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
SF3B3-207ENST00000566095 BAZ2BQ9UIF8 2168 aaKnown RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 PFASO15067 1338 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 PTPRFP10586 1907 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 LAD1O00515 517 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 ALDH1A1P00352 501 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 ALAS1P13196 640 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 STAT3P40763 770 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 HERVK_113P62684 666 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 NOGQ13253 232 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 PLS1Q14651 629 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 STK38Q15208 465 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 SLC35G1Q2M3R5 365 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 ADALQ6DHV7 355 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 RASAL3Q86YV0 1011 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 ELOA2Q8IYF1 753 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 LEO1Q8WVC0 666 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 ACAD9Q9H845 621 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 DDX19AQ9NUU7 478 aaKnown RBP11.2□□□□□ -0.62
SF3B3-207ENST00000566095 FBXO28Q9NVF7 368 aa11.2□□□□□ -0.62
SF3B3-207ENST00000566095 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-207ENST00000566095 PDHXO00330 501 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 CAVIN2O95810 425 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 APLP1P51693 650 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 SLC39A14Q15043 492 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 TREML2Q5T2D2 321 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 PIK3AP1Q6ZUJ8 805 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 NEK8Q86SG6 692 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 RIOX2Q8IUF8 465 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 MROH8Q9H579 483 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
SF3B3-207ENST00000566095 RNF146Q9NTX7 359 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
SF3B3-207ENST00000566095 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms