RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 NLRC3Q7RTR2 1065 aa5.85□□□□□ -1.47
PALB2-204ENST00000566069 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
PALB2-204ENST00000566069 SLC12A9Q9BXP2 914 aa5.85□□□□□ -1.47
PALB2-204ENST00000566069 KBTBD4Q9NVX7 518 aa5.85□□□□□ -1.47
PALB2-204ENST00000566069 KIAA1522Q9P206 1035 aaPredicted RBP5.85□□□□□ -1.47
PALB2-204ENST00000566069 SHOXO15266 292 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 SRGAP3O43295 1099 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 CYBBP04839 570 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 ITGB3P05106 788 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
PALB2-204ENST00000566069 RBM25P49756 843 aaKnown RBP5.84□□□□□ -1.47
PALB2-204ENST00000566069 ERMP1Q7Z2K6 904 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 DDX1Q92499 740 aaKnown RBP5.84□□□□□ -1.47
PALB2-204ENST00000566069 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 FBXL21Q9UKT6 434 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 PCDHB12Q9Y5F1 795 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 PMF1-BGLAPU3KQ54 211 aa5.84□□□□□ -1.47
PALB2-204ENST00000566069 TNFRSF10CO14798 259 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 MC3RP41968 323 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 PRR5P85299 388 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 ZXDAP98168 799 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 ZNF827Q17R98 1081 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 HLA-DQA1Q5Y7H0 255 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 ZNF428Q96B54 188 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 SLC6A18Q96N87 628 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 MKRN2Q9H000 416 aaKnown RBP5.83□□□□□ -1.48
PALB2-204ENST00000566069 USP40Q9NVE5 1235 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 PRR13Q9NZ81 148 aa5.83□□□□□ -1.48
PALB2-204ENST00000566069 MATN3O15232 486 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 GSNP06396 782 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 GSTM1P09488 218 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 CNR2P34972 360 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 EIF4A3P38919 411 aaKnown RBP5.82□□□□□ -1.48
PALB2-204ENST00000566069 LDLRAD1Q5T700 205 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 TMEM87AQ8NBN3 555 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 SLC9A7Q96T83 725 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 SRRTQ9BXP5 876 aaKnown RBP5.82□□□□□ -1.48
PALB2-204ENST00000566069 BACH2Q9BYV9 841 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
PALB2-204ENST00000566069 METTL5Q9NRN9 209 aaKnown RBP5.82□□□□□ -1.48
PALB2-204ENST00000566069 C9IYK1 514 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 F8W031 263 aaPredicted RBP5.81□□□□□ -1.48
PALB2-204ENST00000566069 FGF10O15520 208 aaPredicted RBP5.81□□□□□ -1.48
PALB2-204ENST00000566069 ASGR2P07307 311 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 C7orf61Q8IZ16 206 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 CARFQ8N187 725 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 ZNF296Q8WUU4 475 aaPredicted RBP5.81□□□□□ -1.48
PALB2-204ENST00000566069 RNF38Q9H0F5 515 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 PDLIM7Q9NR12 457 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 SPATA6Q9NWH7 488 aaPredicted RBP5.81□□□□□ -1.48
PALB2-204ENST00000566069 SMPD4Q9NXE4 827 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 PALD1Q9ULE6 856 aa5.81□□□□□ -1.48
PALB2-204ENST00000566069 SUPT16HQ9Y5B9 1047 aaKnown RBP5.81□□□□□ -1.48
PALB2-204ENST00000566069 A0A1W2PQ27 194 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 A0A1W2PQ64 194 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 A0A1W2PQC6 194 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 A0A1W2PQD8 194 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 SCAMP3O14828 347 aaKnown RBP5.8□□□□□ -1.48
PALB2-204ENST00000566069 NCAM1P13591 858 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 GK5Q6ZS86 529 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 REXO1Q8N1G1 1221 aaKnown RBP5.8□□□□□ -1.48
PALB2-204ENST00000566069 NLGN2Q8NFZ4 835 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 NOX5Q96PH1 765 aa5.8□□□□□ -1.48
PALB2-204ENST00000566069 MEIS3P2A8K0S8 358 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 C1QTNF3-AMACRE9PGA6 284 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 H0Y8X5 98 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 ACRP10323 421 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 ZNF76P36508 570 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 FANCCQ00597 558 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 SEZ6Q53EL9 994 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 SLC16A11Q8NCK7 471 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 FCRL3Q96P31 734 aaPredicted RBP5.79□□□□□ -1.48
PALB2-204ENST00000566069 C1QTNF3Q9BXJ4 246 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 BCAS3Q9H6U6 928 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 UBP1Q9NZI7 540 aa5.79□□□□□ -1.48
PALB2-204ENST00000566069 E9PSI1 815 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 SUV39H1O43463 412 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 TACR1P25103 407 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 HS2ST1Q7LGA3 356 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 ZNF761Q86XN6 746 aaPredicted RBP5.78□□□□□ -1.48
PALB2-204ENST00000566069 JAMLQ86YT9 394 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 NAT16Q8N8M0 369 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 SUCOQ9UBS9 1254 aaKnown RBP5.78□□□□□ -1.48
PALB2-204ENST00000566069 ADAMTS1Q9UHI8 967 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 FAN1Q9Y2M0 1017 aa5.78□□□□□ -1.48
PALB2-204ENST00000566069 GLI4P10075 376 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 ZNF445P59923 1031 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 ANKRD39Q53RE8 183 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 CPZQ66K79 652 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 BRF1Q92994 677 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 RNF34Q969K3 372 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 DSCC1Q9BVC3 393 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 RXFP1Q9HBX9 757 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 FBLN5Q9UBX5 448 aa5.77□□□□□ -1.49
PALB2-204ENST00000566069 FSHBP01225 129 aa5.76□□□□□ -1.49
PALB2-204ENST00000566069 PMLP29590 882 aa5.76□□□□□ -1.49
PALB2-204ENST00000566069 CORO7P57737 925 aa5.76□□□□□ -1.49
PALB2-204ENST00000566069 LRRFIP1Q32MZ4 808 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms