RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NEMFO60524 1076 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 SNAP25P60880 206 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 IL17AQ16552 155 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 DPY19L2Q6NUT2 758 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 CCDC34Q96HJ3 373 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 EPSTI1Q96J88 318 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 PYM1Q9BRP8 204 aaKnown RBP22.22■■□□□ 1.15
CLN6-205ENST00000564846 RANBP17Q9H2T7 1088 aaKnown RBP22.22■■□□□ 1.15
CLN6-205ENST00000564846 ANO10Q9NW15 660 aa22.22■■□□□ 1.15
CLN6-205ENST00000564846 WDR46O15213 610 aaKnown RBP22.21■■□□□ 1.15
CLN6-205ENST00000564846 ZRSR1Q15695 479 aaKnown RBP22.21■■□□□ 1.15
CLN6-205ENST00000564846 PRAMEF18Q5VWM3 479 aa22.21■■□□□ 1.15
CLN6-205ENST00000564846 WRNIP1Q96S55 665 aa22.21■■□□□ 1.15
CLN6-205ENST00000564846 TMEM60Q9H2L4 133 aa22.21■■□□□ 1.15
CLN6-205ENST00000564846 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
CLN6-205ENST00000564846 AP3B2Q13367 1082 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 KIFC2Q96AC6 838 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 NAP1L4Q99733 375 aaKnown RBP22.2■■□□□ 1.14
CLN6-205ENST00000564846 WDR18Q9BV38 432 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 PICK1Q9NRD5 415 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 USP25Q9UHP3 1055 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 OR52Z1P0C646 297 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 USP14P54578 494 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 CCDC173Q0VFZ6 552 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 USH1GQ495M9 461 aa22.2■■□□□ 1.14
CLN6-205ENST00000564846 MEIS2O14770 477 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 TXLNAP40222 546 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 PPP4R3AQ6IN85 833 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 PDILTQ8N807 584 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 ERCC4Q92889 916 aaPredicted RBP22.19■■□□□ 1.14
CLN6-205ENST00000564846 DCPSQ96C86 337 aaKnown RBP22.19■■□□□ 1.14
CLN6-205ENST00000564846 KLRG1Q96E93 195 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 L3MBTL3Q96JM7 780 aaPredicted RBP22.19■■□□□ 1.14
CLN6-205ENST00000564846 DNAJC25Q9H1X3 360 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 SERTAD1Q9UHV2 236 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 TUBE1Q9UJT0 475 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 UTRNP46939 3433 aa22.19■■□□□ 1.14
CLN6-205ENST00000564846 USP17L15C9J2P7 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L13C9JLJ4 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L11C9JVI0 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L18D6R9N7 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L22D6RA61 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L17D6RBQ6 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L19D6RCP7 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L20D6RJB6 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 ACTN4O43707 911 aaKnown RBP22.18■■□□□ 1.14
CLN6-205ENST00000564846 ZNF165P49910 485 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L24Q0WX57 530 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 USP17L6PQ6QN14 398 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 ZKSCAN4Q969J2 545 aaPredicted RBP22.18■■□□□ 1.14
CLN6-205ENST00000564846 AK8Q96MA6 479 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
CLN6-205ENST00000564846 DOCK1Q14185 1865 aa22.18■■□□□ 1.14
CLN6-205ENST00000564846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 FOSP01100 380 aaPredicted RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 GCFC2P16383 781 aaKnown RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 MDM2Q00987 491 aaPredicted RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 SULF1Q8IWU6 871 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 PPP1R9BQ96SB3 815 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 PIK3CDO00329 1044 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 SLFN14P0C7P3 912 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 PTPRAP18433 802 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 PNOCQ13519 176 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 MTMR2Q13614 643 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 POSTNQ15063 836 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 GPR162Q16538 588 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 NOL9Q5SY16 702 aaKnown RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 PRPF38AQ8NAV1 312 aaKnown RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 ZNF280CQ8ND82 737 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 DHX58Q96C10 678 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 ANO3Q9BYT9 981 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 NAT10Q9H0A0 1025 aaKnown RBP22.17■■□□□ 1.14
CLN6-205ENST00000564846 CBX8Q9HC52 389 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 SSC5DA1L4H1 1573 aa22.17■■□□□ 1.14
CLN6-205ENST00000564846 A0A087X0B3 334 aa22.16■■□□□ 1.14
CLN6-205ENST00000564846 EDIL3O43854 480 aa22.16■■□□□ 1.14
CLN6-205ENST00000564846 USP11P51784 963 aa22.16■■□□□ 1.14
CLN6-205ENST00000564846 CEP57L1Q8IYX8 460 aa22.16■■□□□ 1.14
CLN6-205ENST00000564846 IQUBQ8NA54 791 aa22.16■■□□□ 1.14
CLN6-205ENST00000564846 FBXO28Q9NVF7 368 aa22.16■■□□□ 1.14
CLN6-205ENST00000564846 GRIN3BO60391 1043 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 TDP2O95551 362 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 BACE1P56817 501 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 NLRP12P59046 1061 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 SPP2Q13103 211 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 CALCRLQ16602 461 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 CCDC174Q6PII3 467 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 USP50Q70EL3 339 aaPredicted RBP22.15■■□□□ 1.14
CLN6-205ENST00000564846 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 MTMR9Q96QG7 549 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 SLF1Q9BQI6 1058 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 EMILIN3Q9NT22 766 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 SPDYE3A6NKU9 549 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 C11orf57Q6ZUT1 292 aaPredicted RBP22.15■■□□□ 1.14
CLN6-205ENST00000564846 CCSER1Q9C0I3 900 aa22.15■■□□□ 1.14
CLN6-205ENST00000564846 MRPL11Q9Y3B7 192 aaKnown RBP22.15■■□□□ 1.14
CLN6-205ENST00000564846 ABCB11O95342 1321 aa22.14■■□□□ 1.13
CLN6-205ENST00000564846 OPLAHO14841 1288 aa22.14■■□□□ 1.13
CLN6-205ENST00000564846 VCAM1P19320 739 aa22.14■■□□□ 1.13
CLN6-205ENST00000564846 E2F4Q16254 413 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms