RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 GUCD1Q96NT3 240 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 TOMM22Q9NS69 142 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 MTMR7Q9Y216 660 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 UNC80Q8N2C7 3258 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 CTAGE5O15320 804 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 SDSP20132 328 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 EPHB4P54760 987 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 RRP12Q5JTH9 1297 aaKnown RBP21.8■■□□□ 1.08
CLN6-204ENST00000564752 BTNL9Q6UXG8 535 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 DIAPH3Q9NSV4 1193 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 CYP39A1Q9NYL5 469 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
CLN6-204ENST00000564752 CUL9Q8IWT3 2517 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.79■■□□□ 1.08
CLN6-204ENST00000564752 ICAM1P05362 532 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 TOP1P11387 765 aaKnown RBP21.79■■□□□ 1.08
CLN6-204ENST00000564752 MFAP1P55081 439 aaKnown RBP21.79■■□□□ 1.08
CLN6-204ENST00000564752 SMAD3P84022 425 aaKnown RBP21.79■■□□□ 1.08
CLN6-204ENST00000564752 TNFAIP2Q03169 654 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 CCDC96Q2M329 555 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 ZNF697Q5TEC3 545 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 TTBK2Q6IQ55 1244 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 FAM161BQ96MY7 647 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 RANBP17Q9H2T7 1088 aaKnown RBP21.79■■□□□ 1.08
CLN6-204ENST00000564752 CCPG1Q9ULG6 757 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 ASTN1O14525 1302 aa21.79■■□□□ 1.08
CLN6-204ENST00000564752 SLC16A2P36021 539 aa21.78■■□□□ 1.08
CLN6-204ENST00000564752 FPGSQ05932 587 aa21.78■■□□□ 1.08
CLN6-204ENST00000564752 VTI1AQ96AJ9 217 aa21.78■■□□□ 1.08
CLN6-204ENST00000564752 TBX21Q9UL17 535 aa21.78■■□□□ 1.08
CLN6-204ENST00000564752 GNEQ9Y223 722 aaKnown RBP21.78■■□□□ 1.08
CLN6-204ENST00000564752 MROH7Q68CQ1 1323 aa21.78■■□□□ 1.08
CLN6-204ENST00000564752 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
CLN6-204ENST00000564752 ARVCFO00192 962 aa21.77■■□□□ 1.08
CLN6-204ENST00000564752 HIP1O00291 1037 aa21.77■■□□□ 1.08
CLN6-204ENST00000564752 TIMP1P01033 207 aa21.77■■□□□ 1.08
CLN6-204ENST00000564752 HAND2P61296 217 aa21.77■■□□□ 1.08
CLN6-204ENST00000564752 SEMA6BQ9H3T3 888 aa21.77■■□□□ 1.08
CLN6-204ENST00000564752 DDX49Q9Y6V7 483 aaKnown RBP21.77■■□□□ 1.08
CLN6-204ENST00000564752 LAMA4Q16363 1823 aa21.77■■□□□ 1.08
CLN6-204ENST00000564752 PCP11498 1178 aaKnown RBP21.76■■□□□ 1.07
CLN6-204ENST00000564752 BEX3Q00994 111 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 AKNAD1Q5T1N1 836 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 SYDE2Q5VT97 1194 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 TAPT1Q6NXT6 567 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
CLN6-204ENST00000564752 NSMFQ6X4W1 530 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 MFSD6Q6ZSS7 791 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 NOL8Q76FK4 1167 aaKnown RBP21.76■■□□□ 1.07
CLN6-204ENST00000564752 RNPC3Q96LT9 517 aaKnown RBP21.76■■□□□ 1.07
CLN6-204ENST00000564752 TTC14Q96N46 770 aa21.76■■□□□ 1.07
CLN6-204ENST00000564752 SMPD1P17405 629 aa21.75■■□□□ 1.07
CLN6-204ENST00000564752 PDE4AP27815 886 aa21.75■■□□□ 1.07
CLN6-204ENST00000564752 IQSEC1Q6DN90 963 aa21.75■■□□□ 1.07
CLN6-204ENST00000564752 MORC4Q8TE76 937 aa21.75■■□□□ 1.07
CLN6-204ENST00000564752 PURBQ96QR8 312 aaKnown RBP21.75■■□□□ 1.07
CLN6-204ENST00000564752 GPCPD1Q9NPB8 672 aa21.75■■□□□ 1.07
CLN6-204ENST00000564752 PDGFCQ9NRA1 345 aa21.75■■□□□ 1.07
CLN6-204ENST00000564752 FRMPD2Q68DX3 1309 aaPredicted RBP21.75■■□□□ 1.07
CLN6-204ENST00000564752 PDHBP11177 359 aa21.74■■□□□ 1.07
CLN6-204ENST00000564752 BAATQ14032 418 aaPredicted RBP21.74■■□□□ 1.07
CLN6-204ENST00000564752 MFSD5Q6N075 450 aa21.74■■□□□ 1.07
CLN6-204ENST00000564752 TLK2Q86UE8 772 aa21.74■■□□□ 1.07
CLN6-204ENST00000564752 TBC1D10CQ8IV04 446 aa21.74■■□□□ 1.07
CLN6-204ENST00000564752 Q9Y3F1 56 aa21.74■■□□□ 1.07
CLN6-204ENST00000564752 MCM3APO60318 1980 aa21.74■■□□□ 1.07
CLN6-204ENST00000564752 DYNC1LI2O43237 492 aaPredicted RBP21.73■■□□□ 1.07
CLN6-204ENST00000564752 CABYRO75952 493 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 FSCN1Q16658 493 aaKnown RBP21.73■■□□□ 1.07
CLN6-204ENST00000564752 TTC22Q5TAA0 569 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 EEPD1Q7L9B9 569 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 FBXO16Q8IX29 292 aaPredicted RBP21.73■■□□□ 1.07
CLN6-204ENST00000564752 FAM126BQ8IXS8 530 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 SLC43A3Q8NBI5 491 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 CDX2Q99626 313 aaPredicted RBP21.73■■□□□ 1.07
CLN6-204ENST00000564752 AP5M1Q9H0R1 490 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 TTYH1Q9H313 450 aaPredicted RBP21.73■■□□□ 1.07
CLN6-204ENST00000564752 RNF41Q9H4P4 317 aaPredicted RBP21.73■■□□□ 1.07
CLN6-204ENST00000564752 VTA1Q9NP79 307 aa21.73■■□□□ 1.07
CLN6-204ENST00000564752 NFIBO00712 420 aa21.72■■□□□ 1.07
CLN6-204ENST00000564752 TLR3O15455 904 aaKnown RBP21.72■■□□□ 1.07
CLN6-204ENST00000564752 CD4P01730 458 aa21.72■■□□□ 1.07
CLN6-204ENST00000564752 SNHG28P0DPA3 235 aa21.72■■□□□ 1.07
CLN6-204ENST00000564752 PTGS1P23219 599 aa21.72■■□□□ 1.07
CLN6-204ENST00000564752 ZNF543Q08ER8 600 aa21.72■■□□□ 1.07
CLN6-204ENST00000564752 CXCL17Q6UXB2 119 aa21.72■■□□□ 1.07
CLN6-204ENST00000564752 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.72■■□□□ 1.07
CLN6-204ENST00000564752 ADD3Q9UEY8 706 aaKnown RBP21.72■■□□□ 1.07
CLN6-204ENST00000564752 CDH23Q9H251 3354 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 LOC102724159A0A0B4J2E5 919 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 ZNF213O14771 459 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 GSPT1P15170 499 aaKnown RBP21.71■■□□□ 1.07
CLN6-204ENST00000564752 PWP2Q15269 919 aaKnown RBP21.71■■□□□ 1.07
CLN6-204ENST00000564752 TMEM63BQ5T3F8 832 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 C16orf59Q7L2K0 433 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 CLEC4DQ8WXI8 215 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 ESR2Q92731 530 aa21.71■■□□□ 1.07
CLN6-204ENST00000564752 PNMA2Q9UL42 364 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms