RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PKN1Q16512 942 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 RCSD1Q6JBY9 416 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 IFNL1Q8IU54 200 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CEP57L1Q8IYX8 460 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ZNF280CQ8ND82 737 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CCDC17Q96LX7 622 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TIGD1Q96MW7 591 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 LZTS2Q9BRK4 669 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 SDF4Q9BRK5 362 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 PHF20Q9BVI0 1012 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CBX8Q9HC52 389 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 RRAGDQ9NQL2 400 aaPredicted RBP8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 GINM1Q9NU53 330 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 VPS54Q9P1Q0 977 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 AFG3L2Q9Y4W6 797 aa8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 V9GY48 417 aaPredicted RBP8.49□□□□□ -1.05
MAP1LC3B-205ENST00000564638 PLIN4Q96Q06 1357 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 GREB1LQ9C091 1923 aaPredicted RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 GOLGA6L6A8MZA4 724 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 BTBD19C9JJ37 291 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 GOLGA6L19H0YKK7 550 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CXCL11O14625 94 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 RAD21O60216 631 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ZNF202O95125 648 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TBC1D8O95759 1140 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CALML3P27482 149 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CLCN1P35523 988 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 SYKP43405 635 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TM4SF4P48230 202 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ZNF165P49910 485 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 INHBEP58166 350 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ICA1Q05084 483 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 MTMR2Q13614 643 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 PFKFB3Q16875 520 aaPredicted RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 RESP18Q5W5W9 173 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 FAM177A1Q8N128 213 aaPredicted RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 SRBD1Q8N5C6 995 aaKnown RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CCDC148Q8NFR7 591 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 NAT10Q9H0A0 1025 aaKnown RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 SH3GLB2Q9NR46 395 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 RNF186Q9NXI6 227 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 FAM13BQ9NYF5 915 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TMOD4Q9NZQ9 345 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 MORC2Q9Y6X9 1032 aaPredicted RBP8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 MUC3AQ02505 3323 aa8.48□□□□□ -1.05
MAP1LC3B-205ENST00000564638 EYSQ5T1H1 3165 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 A0A0G2JLL6 359 aaPredicted RBP8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 FAM237AA0A1B0GTK4 181 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 USP17L10C9JJH3 530 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 TPM3P06753 285 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 NLRP5P59047 1200 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 NR5A1Q13285 461 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 FASTKD5Q7L8L6 764 aaKnown RBP8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 PRRT2Q7Z6L0 340 aaPredicted RBP8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 LUZP1Q86V48 1076 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ACER1Q8TDN7 264 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 OXER1Q8TDS5 423 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 CCDC34Q96HJ3 373 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 PTPN18Q99952 460 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 WDR18Q9BV38 432 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 IL17RBQ9NRM6 502 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 HOOK1Q9UJC3 728 aaKnown RBP8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 STX8Q9UNK0 236 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 ZKSCAN5Q9Y2L8 839 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 LOC285556D6RIA3 1793 aa8.47□□□□□ -1.05
MAP1LC3B-205ENST00000564638 hCG_1642624A0A1W2PR95 340 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SPDYE4A6NLX3 237 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 BECN2A8MW95 431 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 C19orf81C9J6K1 198 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PDHXO00330 501 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ALDH1A1P00352 501 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TOP1P11387 765 aaKnown RBP8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PTPREP23469 700 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TRAPPC10P48553 1259 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TOB1P50616 345 aaPredicted RBP8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 BACE1P56817 501 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PPP4R3BQ5MIZ7 849 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TTC38Q5R3I4 469 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TREML2Q5T2D2 321 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L2Q6R6M4 530 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SHC4Q6S5L8 630 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 C11orf57Q6ZUT1 292 aaPredicted RBP8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ANKRD23Q86SG2 305 aa8.46□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZNF579Q8NAF0 562 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms