RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CYP2C19P33261 490 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 MCM7P33993 719 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 PPP4CP60510 307 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 ZBED6P86452 979 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 ITIH3Q06033 890 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 KIF5AQ12840 1032 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 SPECC1Q5M775 1068 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 C15orf52Q6ZUT6 534 aaKnown RBP8.54□□□□□ -1.04
ATXN3-249ENST00000564606 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 NBPF5PQ86XG9 351 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-249ENST00000564606 ADSSL1Q8N142 457 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 SDR42E1Q8WUS8 393 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 EPSTI1Q96J88 318 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 FAM84BQ96KN1 310 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-249ENST00000564606 PARD6BQ9BYG5 372 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 RIC8AQ9NPQ8 531 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 MCM9Q9NXL9 1143 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-249ENST00000564606 RREB1Q92766 1687 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 A0A087WWV3 80 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 A0A0G2JS52 829 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 NDUFA10O95299 355 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SLC34A2O95436 690 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 PARP1P09874 1014 aaKnown RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 PRLRP16471 622 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 PAFAH1B1P43034 410 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 MECOMQ03112 1051 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 LRRC63Q05C16 580 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 LONRF2Q1L5Z9 754 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 MUM1L1Q5H9M0 696 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 PDXDC2PQ6P474 469 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SV2BQ7L1I2 683 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 NEK8Q86SG6 692 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SYNE4Q8N205 404 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 MB21D1Q8N884 522 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 GOLGA5Q8TBA6 731 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 DNAJC7Q99615 494 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 NT5C3AQ9H0P0 336 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 LZTFL1Q9NQ48 299 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 INTS13Q9NVM9 706 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 NARFQ9UHQ1 456 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SAR1BQ9Y6B6 198 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 AHDC1Q5TGY3 1603 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-249ENST00000564606 KDM3AQ9Y4C1 1321 aa8.53□□□□□ -1.04
ATXN3-249ENST00000564606 SOWAHDA6NJG2 315 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 FOXN1O15353 648 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 RPS6KA4O75676 772 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 PLEKHA8P1O95397 391 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 GYPCP04921 128 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 TCP1P17987 556 aaKnown RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 MTIF2P46199 727 aaKnown RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 GYG1P46976 350 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 STX17P56962 302 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 TFAP4Q01664 338 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 APBA1Q02410 837 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 TBC1D8BQ0IIM8 1120 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 PDIA5Q14554 519 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 KARSQ15046 597 aaKnown RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 VWA3BQ502W6 1294 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 GLE1Q53GS7 698 aaKnown RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 C12orf60Q5U649 245 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 CABP7Q86V35 215 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 SRBD1Q8N5C6 995 aaKnown RBP8.52□□□□□ -1.05
ATXN3-249ENST00000564606 CSGALNACT2Q8N6G5 542 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 CAGE1Q8TC20 777 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 P2RX5Q93086 422 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 CCDC42Q96M95 316 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 C7orf25Q9BPX7 421 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 CRACR2AQ9BSW2 395 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 ZMYND12Q9H0C1 365 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 DEF6Q9H4E7 631 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 KBTBD4Q9NVX7 518 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 XDHP47989 1333 aa8.52□□□□□ -1.05
ATXN3-249ENST00000564606 MAP2K7O14733 419 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 OPA1O60313 960 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 SRGNP10124 158 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 ANXA13P27216 316 aa8.51□□□□□ -1.05
ATXN3-249ENST00000564606 OAS2P29728 719 aaKnown RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
ATXN3-249ENST00000564606 NAPAP54920 295 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms