RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TTBK2Q6IQ55 1244 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 BTNL9Q6UXG8 535 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 RANBP17Q9H2T7 1088 aaKnown RBP28.18■■■□□ 2.1
NME3-206ENST00000564252 CYP39A1Q9NYL5 469 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 CCPG1Q9ULG6 757 aa28.18■■■□□ 2.1
NME3-206ENST00000564252 UNC80Q8N2C7 3258 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 ICAM1P05362 532 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 CDK7P50613 346 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 HAND2P61296 217 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 B4GALNT3Q6L9W6 998 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 RILPL2Q969X0 211 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 FAM161BQ96MY7 647 aa28.17■■■□□ 2.1
NME3-206ENST00000564252 CDH23Q9H251 3354 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 SLC16A2P36021 539 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 TNFAIP2Q03169 654 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 GNASQ5JWF2 1037 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 ZNF697Q5TEC3 545 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 RWDD1Q9H446 243 aaPredicted RBP28.16■■■□□ 2.1
NME3-206ENST00000564252 TBX21Q9UL17 535 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 DDX49Q9Y6V7 483 aaKnown RBP28.16■■■□□ 2.1
NME3-206ENST00000564252 MROH7Q68CQ1 1323 aa28.16■■■□□ 2.1
NME3-206ENST00000564252 SMAD3P84022 425 aaKnown RBP28.15■■■□□ 2.1
NME3-206ENST00000564252 FPGSQ05932 587 aa28.15■■■□□ 2.1
NME3-206ENST00000564252 SYDE2Q5VT97 1194 aa28.15■■■□□ 2.1
NME3-206ENST00000564252 YTHDC1Q96MU7 727 aaKnown RBP28.15■■■□□ 2.1
NME3-206ENST00000564252 GNEQ9Y223 722 aaKnown RBP28.15■■■□□ 2.1
NME3-206ENST00000564252 A0A0U1RQG5 324 aaPredicted RBP28.14■■■□□ 2.1
NME3-206ENST00000564252 AKNAD1Q5T1N1 836 aa28.14■■■□□ 2.1
NME3-206ENST00000564252 NSMFQ6X4W1 530 aa28.14■■■□□ 2.1
NME3-206ENST00000564252 CHD1LQ86WJ1 897 aa28.14■■■□□ 2.1
NME3-206ENST00000564252 TBC1D10CQ8IV04 446 aa28.14■■■□□ 2.1
NME3-206ENST00000564252 PLEKHM2Q8IWE5 1019 aa28.14■■■□□ 2.1
NME3-206ENST00000564252 OSBPL3Q9H4L5 887 aa28.14■■■□□ 2.1
NME3-206ENST00000564252 FRMPD2Q68DX3 1309 aaPredicted RBP28.14■■■□□ 2.09
NME3-206ENST00000564252 EYSQ5T1H1 3165 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 ARVCFO00192 962 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 TIMP1P01033 207 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 IGHDP01880 384 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 PCP11498 1178 aaKnown RBP28.13■■■□□ 2.09
NME3-206ENST00000564252 SDSP20132 328 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 BEX3Q00994 111 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 VTI1AQ96AJ9 217 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 RNPC3Q96LT9 517 aaKnown RBP28.13■■■□□ 2.09
NME3-206ENST00000564252 PURBQ96QR8 312 aaKnown RBP28.13■■■□□ 2.09
NME3-206ENST00000564252 GPCPD1Q9NPB8 672 aa28.13■■■□□ 2.09
NME3-206ENST00000564252 PDHBP11177 359 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 NUCB1Q02818 461 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 TAPT1Q6NXT6 567 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 MFSD6Q6ZSS7 791 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 TLK2Q86UE8 772 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 MORC4Q8TE76 937 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 PDGFCQ9NRA1 345 aa28.12■■■□□ 2.09
NME3-206ENST00000564252 SMPD1P17405 629 aa28.11■■■□□ 2.09
NME3-206ENST00000564252 PTGS1P23219 599 aa28.11■■■□□ 2.09
NME3-206ENST00000564252 MFAP1P55081 439 aaKnown RBP28.11■■■□□ 2.09
NME3-206ENST00000564252 NOL8Q76FK4 1167 aaKnown RBP28.11■■■□□ 2.09
NME3-206ENST00000564252 FBXO16Q8IX29 292 aaPredicted RBP28.11■■■□□ 2.09
NME3-206ENST00000564252 TTC14Q96N46 770 aa28.11■■■□□ 2.09
NME3-206ENST00000564252 DLL1O00548 723 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 NFIBO00712 420 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 SNHG28P0DPA3 235 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 BAATQ14032 418 aaPredicted RBP28.1■■■□□ 2.09
NME3-206ENST00000564252 EEPD1Q7L9B9 569 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 FAM126BQ8IXS8 530 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 SEMA6BQ9H3T3 888 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 LAMA4Q16363 1823 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 NEDD4P46934 1319 aa28.1■■■□□ 2.09
NME3-206ENST00000564252 ZNF543Q08ER8 600 aa28.09■■■□□ 2.09
NME3-206ENST00000564252 TMEM63BQ5T3F8 832 aa28.09■■■□□ 2.09
NME3-206ENST00000564252 IQSEC1Q6DN90 963 aa28.09■■■□□ 2.09
NME3-206ENST00000564252 MFSD5Q6N075 450 aa28.09■■■□□ 2.09
NME3-206ENST00000564252 TTYH1Q9H313 450 aaPredicted RBP28.09■■■□□ 2.09
NME3-206ENST00000564252 RNF41Q9H4P4 317 aaPredicted RBP28.09■■■□□ 2.09
NME3-206ENST00000564252 VTA1Q9NP79 307 aa28.09■■■□□ 2.09
NME3-206ENST00000564252 FSCN1Q16658 493 aaKnown RBP28.08■■■□□ 2.09
NME3-206ENST00000564252 CXCL17Q6UXB2 119 aa28.08■■■□□ 2.09
NME3-206ENST00000564252 SLC43A3Q8NBI5 491 aa28.08■■■□□ 2.09
NME3-206ENST00000564252 EXOC6Q8TAG9 804 aa28.08■■■□□ 2.09
NME3-206ENST00000564252 AP5M1Q9H0R1 490 aa28.08■■■□□ 2.09
NME3-206ENST00000564252 CUL9Q8IWT3 2517 aa28.07■■■□□ 2.08
NME3-206ENST00000564252 DYNC1LI2O43237 492 aaPredicted RBP28.07■■■□□ 2.08
NME3-206ENST00000564252 CD4P01730 458 aa28.07■■■□□ 2.08
NME3-206ENST00000564252 CLEC4DQ8WXI8 215 aa28.07■■■□□ 2.08
NME3-206ENST00000564252 ESR2Q92731 530 aa28.07■■■□□ 2.08
NME3-206ENST00000564252 CDX2Q99626 313 aaPredicted RBP28.07■■■□□ 2.08
NME3-206ENST00000564252 ADD3Q9UEY8 706 aaKnown RBP28.07■■■□□ 2.08
NME3-206ENST00000564252 Q9Y3F1 56 aa28.07■■■□□ 2.08
NME3-206ENST00000564252 CABYRO75952 493 aa28.06■■■□□ 2.08
NME3-206ENST00000564252 ALDH5A1P51649 535 aaPredicted RBP28.06■■■□□ 2.08
NME3-206ENST00000564252 CWC27Q6UX04 472 aaKnown RBP28.06■■■□□ 2.08
NME3-206ENST00000564252 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.06■■■□□ 2.088e-10■□□□□ 9.4
NME3-206ENST00000564252 LOC102724159A0A0B4J2E5 919 aa28.05■■■□□ 2.08
NME3-206ENST00000564252 PTPDC1A2A3K4 754 aa28.05■■■□□ 2.08
NME3-206ENST00000564252 ZNF213O14771 459 aa28.05■■■□□ 2.08
NME3-206ENST00000564252 TLR3O15455 904 aaKnown RBP28.05■■■□□ 2.08
NME3-206ENST00000564252 PWP2Q15269 919 aaKnown RBP28.05■■■□□ 2.08
NME3-206ENST00000564252 SLC30A10Q6XR72 485 aa28.05■■■□□ 2.08
NME3-206ENST00000564252 KIAA1211Q6ZU35 1233 aa28.05■■■□□ 2.08
NME3-206ENST00000564252 ZKSCAN3Q9BRR0 538 aa28.05■■■□□ 2.08
NME3-206ENST00000564252 GRIN2DO15399 1336 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms