RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 MCF2L2Q86YR7 1114 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 PRO3102Q9H379 93 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 Q9Y3F1 56 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 ZEB2O60315 1214 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 SLC16A2P36021 539 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 RTP1P59025 263 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 DNERQ8NFT8 737 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 FGD4Q96M96 766 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 ZKSCAN3Q9BRR0 538 aa17.31■□□□□ 0.36
SNX29-203ENST00000564111 MROH7Q68CQ1 1323 aa17.3■□□□□ 0.36
SNX29-203ENST00000564111 SLC39A5Q6ZMH5 540 aa17.3■□□□□ 0.36
SNX29-203ENST00000564111 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
SNX29-203ENST00000564111 SYNRGQ9UMZ2 1314 aa17.3■□□□□ 0.36
SNX29-203ENST00000564111 GJA9P57773 515 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 IQSEC1Q6DN90 963 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 RNF207Q6ZRF8 634 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 LBHD1Q9BQE6 289 aaPredicted RBP17.29■□□□□ 0.36
SNX29-203ENST00000564111 MRPL11Q9Y3B7 192 aaKnown RBP17.29■□□□□ 0.36
SNX29-203ENST00000564111 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 CABYRO75952 493 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 NEFLP07196 543 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 FXR1P51114 621 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNX29-203ENST00000564111 SEC23AQ15436 765 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 CDC37Q16543 378 aaPredicted RBP17.29■□□□□ 0.36
SNX29-203ENST00000564111 MUM1L1Q5H9M0 696 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 GDF15Q99988 308 aa17.29■□□□□ 0.36
SNX29-203ENST00000564111 CYP21A2P08686 494 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
SNX29-203ENST00000564111 WTAPQ15007 396 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 AP5M1Q9H0R1 490 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
SNX29-203ENST00000564111 RBM8AQ9Y5S9 174 aaKnown RBP17.28■□□□□ 0.36
SNX29-203ENST00000564111 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
SNX29-203ENST00000564111 NKRFO15226 690 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNX29-203ENST00000564111 ADCYAP1R1P41586 468 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
SNX29-203ENST00000564111 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 PTH1RQ03431 593 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 TMTC2Q8N394 836 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 KATNBL1Q9H079 304 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
SNX29-203ENST00000564111 ELP1O95163 1332 aa17.28■□□□□ 0.36
SNX29-203ENST00000564111 E7EWF7 191 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.36
SNX29-203ENST00000564111 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 RASGRP2Q7LDG7 609 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 FBXO11Q86XK2 927 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 CLEC4DQ8WXI8 215 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 IL25Q9H293 177 aa17.27■□□□□ 0.36
SNX29-203ENST00000564111 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
SNX29-203ENST00000564111 A0A1W2PQ45 241 aaPredicted RBP17.27■□□□□ 0.35
SNX29-203ENST00000564111 A0A1W2PQY0 241 aa17.27■□□□□ 0.35
SNX29-203ENST00000564111 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.35
SNX29-203ENST00000564111 SNAP25P60880 206 aa17.27■□□□□ 0.35
SNX29-203ENST00000564111 BAATQ14032 418 aaPredicted RBP17.27■□□□□ 0.35
SNX29-203ENST00000564111 GRM4Q14833 912 aa17.27■□□□□ 0.35
SNX29-203ENST00000564111 ANO1Q5XXA6 986 aa17.27■□□□□ 0.35
SNX29-203ENST00000564111 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.35
SNX29-203ENST00000564111 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.35
SNX29-203ENST00000564111 DDAH1O94760 285 aa17.26■□□□□ 0.35
SNX29-203ENST00000564111 ACLYP53396 1101 aa17.26■□□□□ 0.35
SNX29-203ENST00000564111 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
SNX29-203ENST00000564111 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
SNX29-203ENST00000564111 TOX2Q96NM4 488 aa17.26■□□□□ 0.35
SNX29-203ENST00000564111 CDC45O75419 566 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 PGK1P00558 417 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 PDE4DQ08499 809 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 TMEM87BQ96K49 555 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 AMNQ9BXJ7 453 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 STARD7Q9NQZ5 370 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
SNX29-203ENST00000564111 NFIBO00712 420 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 CALM1P0DP23 149 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 CALM2P0DP24 149 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 CALM3P0DP25 149 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 KIF5BP33176 963 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
SNX29-203ENST00000564111 GNAQP50148 359 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
SNX29-203ENST00000564111 BRDTQ58F21 947 aaPredicted RBP17.25■□□□□ 0.35
SNX29-203ENST00000564111 TMEM67Q5HYA8 995 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
SNX29-203ENST00000564111 UBE2OQ9C0C9 1292 aaKnown RBP17.25■□□□□ 0.35
SNX29-203ENST00000564111 RBM47A0AV96 593 aaKnown RBP17.24■□□□□ 0.35
SNX29-203ENST00000564111 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
SNX29-203ENST00000564111 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms