RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TYW1BQ6NUM6 668 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 LBX2Q6XYB7 198 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 KRT25Q7Z3Z0 450 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 MCF2L2Q86YR7 1114 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
CLK3-214ENST00000564096 ASCC2Q9H1I8 757 aaPredicted RBP14.69□□□□□ -0.06
CLK3-214ENST00000564096 PSTPIP2Q9H939 334 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 ZCCHC17Q9NP64 241 aaKnown RBP14.69□□□□□ -0.06
CLK3-214ENST00000564096 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 BTBD18B2RXH4 712 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 NCLP19338 710 aaKnown RBP14.68□□□□□ -0.06
CLK3-214ENST00000564096 HERVK_113P62684 666 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 AP3B2Q13367 1082 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 MOGSQ13724 837 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 SNRNP48Q6IEG0 339 aaKnown RBP14.68□□□□□ -0.06
CLK3-214ENST00000564096 CPXCR1Q8N123 301 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 MS4A4AQ96JQ5 239 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 RAVER2Q9HCJ3 691 aaKnown RBP14.68□□□□□ -0.06
CLK3-214ENST00000564096 CFAP45Q9UL16 551 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 ADAMTS5Q9UNA0 930 aa14.68□□□□□ -0.06
CLK3-214ENST00000564096 KIF28PB7ZC32 967 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 PDHXO00330 501 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 TRAPPC10P48553 1259 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 APLP1P51693 650 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 INHBEP58166 350 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 NR5A1Q13285 461 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 MYSM1Q5VVJ2 828 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 GPAT2Q6NUI2 795 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 SAMD3Q8N6K7 520 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 SHISA4Q96DD7 197 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 MAF1Q9H063 256 aa14.67□□□□□ -0.06
CLK3-214ENST00000564096 ZNF536O15090 1300 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 PARP14Q460N5 1801 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 TESPA1A2RU30 521 aaPredicted RBP14.66□□□□□ -0.06
CLK3-214ENST00000564096 SPDYE3A6NKU9 549 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 DDX11L8A8MPP1 907 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 BTBD19C9JJ37 291 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 GCOM1H8Y6P7 765 aaPredicted RBP14.66□□□□□ -0.06
CLK3-214ENST00000564096 POLR2MP0CAP2 368 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 ALAS1P13196 640 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 PTMSP20962 102 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 GCLCP48506 637 aaPredicted RBP14.66□□□□□ -0.06
CLK3-214ENST00000564096 PLS1Q14651 629 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 NONOQ15233 471 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■□□□ 13.6
CLK3-214ENST00000564096 NPY5RQ15761 445 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 CLEC17AQ6ZS10 378 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 PIK3AP1Q6ZUJ8 805 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 REPS2Q8NFH8 660 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 OXER1Q8TDS5 423 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 AGBL1Q96MI9 1066 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 SCAND2PQ9GZW5 306 aaPredicted RBP14.66□□□□□ -0.06
CLK3-214ENST00000564096 RNF146Q9NTX7 359 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 FBXO40Q9UH90 709 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 ZNF214Q9UL59 606 aaPredicted RBP14.66□□□□□ -0.06
CLK3-214ENST00000564096 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
CLK3-214ENST00000564096 PIK3CDO00329 1044 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 BMP15O95972 392 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 FOSP01100 380 aaPredicted RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 STAT3P40763 770 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 CCNA1P78396 465 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 NOGQ13253 232 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 TMEM132BQ14DG7 1078 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 FOXD4L6Q3SYB3 417 aaPredicted RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 FOXD4L3Q6VB84 417 aaPredicted RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 TNFRSF25Q93038 417 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 P2RX7Q99572 595 aaKnown RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 PAGR1Q9BTK6 254 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 HOMER2Q9NSB8 354 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 MAP3K20Q9NYL2 800 aaKnown RBP14.65□□□□□ -0.06
CLK3-214ENST00000564096 PCDHA6Q9UN73 950 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 CEP131Q9UPN4 1083 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 PCDHA8Q9Y5H6 950 aa14.65□□□□□ -0.06
CLK3-214ENST00000564096 RASSF10A6NK89 507 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 M0R2N6 131 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 FIBPO43427 364 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 SLC25A27O95847 323 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 DNM1Q05193 864 aaKnown RBP14.64□□□□□ -0.07
CLK3-214ENST00000564096 UBE2SQ16763 222 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 RIOX2Q8IUF8 465 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 REM2Q8IYK8 340 aaPredicted RBP14.64□□□□□ -0.07
CLK3-214ENST00000564096 CHST13Q8NET6 341 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 RASGRP4Q8TDF6 673 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 TRERF1Q96PN7 1200 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 SPATC1LQ9H0A9 340 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 POLR3EQ9NVU0 708 aa14.64□□□□□ -0.07
CLK3-214ENST00000564096 RBBP6Q7Z6E9 1792 aaKnown RBP14.64□□□□□ -0.07
CLK3-214ENST00000564096 BAZ2BQ9UIF8 2168 aaKnown RBP14.63□□□□□ -0.07
CLK3-214ENST00000564096 FAM155AB1AL88 458 aaPredicted RBP14.63□□□□□ -0.07
CLK3-214ENST00000564096 CFBP00751 764 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 CLK2P49760 499 aaKnown RBP14.63□□□□□ -0.07
CLK3-214ENST00000564096 GHRHRQ02643 423 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 GRM1Q13255 1194 aa14.63□□□□□ -0.07
CLK3-214ENST00000564096 ORC2Q13416 577 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms