RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 INCENPQ9NQS7 918 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 ZNF536O15090 1300 aa11.24□□□□□ -0.61
CLN6-203ENST00000563917 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 ARVCFO00192 962 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 DLL1O00548 723 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 ZNF213O14771 459 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 TIMP1P01033 207 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 FGRP09769 529 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 SNAP25P60880 206 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 FAAP100Q0VG06 881 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.617e-7■□□□□ 9.4
CLN6-203ENST00000563917 BRDTQ58F21 947 aaPredicted RBP11.23□□□□□ -0.61
CLN6-203ENST00000563917 C9orf50Q5SZB4 431 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 IQSEC1Q6DN90 963 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 TLK2Q86UE8 772 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 TMEM199Q8N511 208 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 SEZ6LQ9BYH1 1024 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
CLN6-203ENST00000563917 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
CLN6-203ENST00000563917 VTA1Q9NP79 307 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 FRMPD2Q68DX3 1309 aaPredicted RBP11.23□□□□□ -0.61
CLN6-203ENST00000563917 LTBP2Q14767 1821 aa11.23□□□□□ -0.61
CLN6-203ENST00000563917 LOC102724159A0A0B4J2E5 919 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 SOWAHBA6NEL2 793 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 FOXP2O15409 715 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 DYNC1LI2O43237 492 aaPredicted RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 SDSP20132 328 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 SLC16A2P36021 539 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 PWP2Q15269 919 aaKnown RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 FSCN1Q16658 493 aaKnown RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 GPATCH4Q5T3I0 446 aaKnown RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 CCSAPQ6IQ19 270 aaPredicted RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 BTNL9Q6UXG8 535 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 KIAA1211Q6ZU35 1233 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 EEPD1Q7L9B9 569 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 SMC5Q8IY18 1101 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 MTIF3Q9H2K0 278 aaKnown RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
CLN6-203ENST00000563917 CTNNA3Q9UI47 895 aa11.22□□□□□ -0.61
CLN6-203ENST00000563917 RAD50Q92878 1312 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 MYADML2A6NDP7 307 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 PDHBP11177 359 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 NOVP48745 357 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 BEX3Q00994 111 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.61
CLN6-203ENST00000563917 IMMTQ16891 758 aaKnown RBP11.21□□□□□ -0.61
CLN6-203ENST00000563917 MUM1L1Q5H9M0 696 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 CWC27Q6UX04 472 aaKnown RBP11.21□□□□□ -0.61
CLN6-203ENST00000563917 RNF207Q6ZRF8 634 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 ZNF589Q86UQ0 364 aaPredicted RBP11.21□□□□□ -0.61
CLN6-203ENST00000563917 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.61
CLN6-203ENST00000563917 FGD4Q96M96 766 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 Q9Y3F1 56 aa11.21□□□□□ -0.61
CLN6-203ENST00000563917 MCM3APO60318 1980 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 TMEM265A0A087WTH1 108 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
CLN6-203ENST00000563917 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
CLN6-203ENST00000563917 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
CLN6-203ENST00000563917 DHX16O60231 1041 aaKnown RBP11.2□□□□□ -0.62
CLN6-203ENST00000563917 CALML3P27482 149 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 CDK7P50613 346 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 NUCB1Q02818 461 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 PDE4DQ08499 809 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 ZNF543Q08ER8 600 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 PSRC1Q6PGN9 363 aaPredicted RBP11.2□□□□□ -0.62
CLN6-203ENST00000563917 CXCL17Q6UXB2 119 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 DGKHQ86XP1 1220 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 PPP1R12CQ9BZL4 782 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 SEMA6BQ9H3T3 888 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 OSBPL3Q9H4L5 887 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
CLN6-203ENST00000563917 WDR19Q8NEZ3 1342 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 SZT2Q5T011 3432 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 ADCY6O43306 1168 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 SMPD1P17405 629 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 ITGB8P26012 769 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 CPT1AP50416 773 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
CLN6-203ENST00000563917 NKX3-2P78367 333 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
CLN6-203ENST00000563917 ITGA7Q13683 1181 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 FAM126BQ8IXS8 530 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
CLN6-203ENST00000563917 UBAC1Q9BSL1 405 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 WDR11Q9BZH6 1224 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 KRT23Q9C075 422 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms