RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 UPF3AQ9H1J1 476 aaKnown RBP8.17□□□□□ -1.1
CDH11-208ENST00000563492 SEMA6BQ9H3T3 888 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 CYP39A1Q9NYL5 469 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 FBXO40Q9UH90 709 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 TBX21Q9UL17 535 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 GRIN2DO15399 1336 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 FRMPD3Q5JV73 1810 aa8.17□□□□□ -1.1
CDH11-208ENST00000563492 MOXD2PA6NHM9 499 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 GRXCR1A8MXD5 290 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 DCDC2CA8MYV0 355 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 TRIM6-TRIM34B2RNG4 842 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 DYNC1LI2O43237 492 aaPredicted RBP8.16□□□□□ -1.1
CDH11-208ENST00000563492 PLA2G6O60733 806 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 GOLGA8HP0CJ92 632 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 ACRP10323 421 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 MYH7P12883 1935 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 CST5P28325 142 aaPredicted RBP8.16□□□□□ -1.1
CDH11-208ENST00000563492 CYP2C18P33260 490 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 PSMC6P62333 389 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 SYDE2Q5VT97 1194 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 TAPT1Q6NXT6 567 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 PLEKHM2Q8IWE5 1019 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 SMC5Q8IY18 1101 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 CLEC4DQ8WXI8 215 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 MYLIPQ8WY64 445 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 RNPC3Q96LT9 517 aaKnown RBP8.16□□□□□ -1.1
CDH11-208ENST00000563492 GLT1D1Q96MS3 346 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 TOX2Q96NM4 488 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDH11-208ENST00000563492 PPP1R12CQ9BZL4 782 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 ZBTB47Q9UFB7 747 aaPredicted RBP8.16□□□□□ -1.1
CDH11-208ENST00000563492 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
CDH11-208ENST00000563492 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
CDH11-208ENST00000563492 MYH8P13535 1937 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 ZNFX1Q9P2E3 1918 aaKnown RBP8.15□□□□□ -1.1
CDH11-208ENST00000563492 ELP1O95163 1332 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 NEDD4P46934 1319 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 ARVCFO00192 962 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 TIMP1P01033 207 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 ICAM1P05362 532 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 FDX1P10109 184 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 PDHBP11177 359 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 TOP1P11387 765 aaKnown RBP8.15□□□□□ -1.1
CDH11-208ENST00000563492 CSF2RAP15509 400 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 SDSP20132 328 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 PBX2P40425 430 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 FPGSQ05932 587 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 TKFCQ3LXA3 575 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 ZNF697Q5TEC3 545 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 BTNL9Q6UXG8 535 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 SLC30A10Q6XR72 485 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 CHD1LQ86WJ1 897 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 FAM126BQ8IXS8 530 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 NUP133Q8WUM0 1156 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 DCAF4Q8WV16 495 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 TBC1D5Q92609 795 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 UBA5Q9GZZ9 404 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 TRPV6Q9H1D0 765 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 IL25Q9H293 177 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 RANBP17Q9H2T7 1088 aaKnown RBP8.15□□□□□ -1.1
CDH11-208ENST00000563492 CUL9Q8IWT3 2517 aa8.15□□□□□ -1.1
CDH11-208ENST00000563492 CCDC171Q6TFL3 1326 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 A0A0U1RQG5 324 aaPredicted RBP8.14□□□□□ -1.11
CDH11-208ENST00000563492 ASB14A6NK59 587 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 CD4P01730 458 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 CALML3P27482 149 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 NKX3-2P78367 333 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 SMAD3P84022 425 aaKnown RBP8.14□□□□□ -1.11
CDH11-208ENST00000563492 NUCB1Q02818 461 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 ZNF543Q08ER8 600 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 GRIN2CQ14957 1233 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
CDH11-208ENST00000563492 TMEM240Q5SV17 173 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 MFSD5Q6N075 450 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 CWC27Q6UX04 472 aaKnown RBP8.14□□□□□ -1.11
CDH11-208ENST00000563492 KIAA1211Q6ZU35 1233 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 ZNF365Q70YC5 407 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 TLK2Q86UE8 772 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 PCSK9Q8NBP7 692 aaKnown RBP8.14□□□□□ -1.11
CDH11-208ENST00000563492 VWCEQ96DN2 955 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 SPC25Q9HBM1 224 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 TCP11L1Q9NUJ3 509 aa8.14□□□□□ -1.11
CDH11-208ENST00000563492 LTBP2Q14767 1821 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 PTPDC1A2A3K4 754 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 SNHG28P0DPA3 235 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 ALDH5A1P51649 535 aaPredicted RBP8.13□□□□□ -1.11
CDH11-208ENST00000563492 CCL23P55773 120 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 ITGA7Q13683 1181 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 IQSEC1Q6DN90 963 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 MFSD6Q6ZSS7 791 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDH11-208ENST00000563492 SLC43A3Q8NBI5 491 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 MORC4Q8TE76 937 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 COPS5Q92905 334 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
CDH11-208ENST00000563492 AP5M1Q9H0R1 490 aa8.13□□□□□ -1.11
CDH11-208ENST00000563492 RWDD1Q9H446 243 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms