RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 TNFAIP2Q03169 654 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 NMIQ13287 307 aaPredicted RBP14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 ZNF697Q5TEC3 545 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 SMC5Q8IY18 1101 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 FAM161BQ96MY7 647 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 TMEM47Q9BQJ4 181 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 LNPKQ9C0E8 428 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 RANBP17Q9H2T7 1088 aaKnown RBP14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 RWDD1Q9H446 243 aaPredicted RBP14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 TOMM22Q9NS69 142 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 TBX21Q9UL17 535 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 MYH4Q9Y623 1939 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 MROH7Q68CQ1 1323 aa14.9□□□□□ -0.02
ABCD1P3-201ENST00000562927 SMCHD1A6NHR9 2005 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 ARVCFO00192 962 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 SLC16A2P36021 539 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 CCDC96Q2M329 555 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 TTBK2Q6IQ55 1244 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 TTC14Q96N46 770 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 SEMA6BQ9H3T3 888 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 MTMR7Q9Y216 660 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 GNEQ9Y223 722 aaKnown RBP14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
ABCD1P3-201ENST00000562927 A0A0U1RQG5 324 aaPredicted RBP14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 TRIM6-TRIM34B2RNG4 842 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 BEX3Q00994 111 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 SYDE2Q5VT97 1194 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 IQSEC1Q6DN90 963 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 MFSD5Q6N075 450 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 TAPT1Q6NXT6 567 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 NSMFQ6X4W1 530 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 MORC4Q8TE76 937 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 RILPL2Q969X0 211 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 VTI1AQ96AJ9 217 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 RNPC3Q96LT9 517 aaKnown RBP14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 OSBPL3Q9H4L5 887 aa14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 DDX49Q9Y6V7 483 aaKnown RBP14.88□□□□□ -0.03
ABCD1P3-201ENST00000562927 PDHBP11177 359 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 SMPD1P17405 629 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 SDSP20132 328 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 HAND2P61296 217 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 BAATQ14032 418 aaPredicted RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 AKNAD1Q5T1N1 836 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 B4GALNT3Q6L9W6 998 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 MFSD6Q6ZSS7 791 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 NOL8Q76FK4 1167 aaKnown RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 TLK2Q86UE8 772 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 CHD1LQ86WJ1 897 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 FAM126BQ8IXS8 530 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 SLC43A3Q8NBI5 491 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 PURBQ96QR8 312 aaKnown RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 CDX2Q99626 313 aaPredicted RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 TTYH1Q9H313 450 aaPredicted RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 GPCPD1Q9NPB8 672 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 Q9Y3F1 56 aa14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 FRMPD2Q68DX3 1309 aaPredicted RBP14.87□□□□□ -0.03
ABCD1P3-201ENST00000562927 CABYRO75952 493 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 CD4P01730 458 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 IGHDP01880 384 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 SNHG28P0DPA3 235 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 NUCB1Q02818 461 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 FSCN1Q16658 493 aaKnown RBP14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 CXCL17Q6UXB2 119 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 C16orf59Q7L2K0 433 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 TBC1D10CQ8IV04 446 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 PLEKHM2Q8IWE5 1019 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 AP5M1Q9H0R1 490 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 RNF41Q9H4P4 317 aaPredicted RBP14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 VTA1Q9NP79 307 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 PNMA2Q9UL42 364 aa14.86□□□□□ -0.03
ABCD1P3-201ENST00000562927 CDH23Q9H251 3354 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 LOC102724159A0A0B4J2E5 919 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 NFIBO00712 420 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 TLR3O15455 904 aaKnown RBP14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 DYNC1LI2O43237 492 aaPredicted RBP14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 NT5C2P49902 561 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 ZNF543Q08ER8 600 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 PWP2Q15269 919 aaKnown RBP14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 TMEM63BQ5T3F8 832 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 EEPD1Q7L9B9 569 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 FBXO16Q8IX29 292 aaPredicted RBP14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 CLEC4DQ8WXI8 215 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 ESR2Q92731 530 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 SEZ6LQ9BYH1 1024 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 PPP4R2Q9NY27 417 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 CHD9Q3L8U1 2897 aa14.85□□□□□ -0.03
ABCD1P3-201ENST00000562927 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.84□□□□□ -0.03
ABCD1P3-201ENST00000562927 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.84□□□□□ -0.03
ABCD1P3-201ENST00000562927 ZNF213O14771 459 aa14.84□□□□□ -0.03
ABCD1P3-201ENST00000562927 ZEB2O60315 1214 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms