RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 DOCK1Q14185 1865 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 CYP2D7A0A087X1C5 515 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 CCL15-CCL14A0A0B4J2E2 113 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 MANSC4A6NHS7 340 aaPredicted RBP6.97□□□□□ -1.29
CDH13-206ENST00000562601 SFI1A8K8P3 1242 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 SMIM22K7EJ46 135 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 M0R2C6 588 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
CDH13-206ENST00000562601 GLRX3O76003 335 aaKnown RBP6.97□□□□□ -1.29
CDH13-206ENST00000562601 GDF11O95390 407 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 POLR3DP05423 398 aaPredicted RBP6.97□□□□□ -1.29
CDH13-206ENST00000562601 PLCD1P51178 756 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 EPHA4P54764 986 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 JAG1P78504 1218 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 FOXK2Q01167 660 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 MAP3K10Q02779 954 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 SREBF2Q12772 1141 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 DPYDQ12882 1025 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 CCL15Q16663 113 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 ZSCAN25Q6NSZ9 544 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 ERO1BQ86YB8 467 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 SLC9A9Q8IVB4 645 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 TNS4Q8IZW8 715 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 KBTBD3Q8NAB2 608 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 BRI3BPQ8WY22 251 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 RILPL2Q969X0 211 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 CRNKL1Q9BZJ0 848 aaKnown RBP6.97□□□□□ -1.29
CDH13-206ENST00000562601 DHX36Q9H2U1 1008 aaKnown RBP6.97□□□□□ -1.29
CDH13-206ENST00000562601 PICK1Q9NRD5 415 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 MCM9Q9NXL9 1143 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 ZDHHC3Q9NYG2 299 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 PI4KBQ9UBF8 816 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 ZHX2Q9Y6X8 837 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 MYH8P13535 1937 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 LAMB1P07942 1786 aa6.97□□□□□ -1.29
CDH13-206ENST00000562601 DDX60LQ5H9U9 1706 aaKnown RBP6.96□□□□□ -1.29
CDH13-206ENST00000562601 TRIM75PA6NK02 468 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 CTNND1O60716 968 aaKnown RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 IGSF3O75054 1194 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 DKK1O94907 266 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 HLA-DOAP06340 250 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 PTPRAP18433 802 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 GMPRP36959 345 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 GTF2A2P52657 109 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 PSMA6P60900 246 aaKnown RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 PPATQ06203 517 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 PPIL2Q13356 520 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 DGKZQ13574 1117 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 UBE3CQ15386 1083 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 TEAD4Q15561 434 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 NOL9Q5SY16 702 aaKnown RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 CCDC129Q6ZRS4 1044 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 SCYL3Q8IZE3 742 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 FAM43AQ8N2R8 423 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 VWA5B2Q8N398 1253 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 FAM200AQ8TCP9 573 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 PBXIP1Q96AQ6 731 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 DYNLL2Q96FJ2 89 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 TRERF1Q96PN7 1200 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 STRBPQ96SI9 672 aaKnown RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 NUCKS1Q9H1E3 243 aaKnown RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 DNAJC18Q9H819 358 aa6.96□□□□□ -1.3
CDH13-206ENST00000562601 DCP1AQ9NPI6 582 aaPredicted RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 COL2A1P02458 1487 aaPredicted RBP6.96□□□□□ -1.3
CDH13-206ENST00000562601 PTPRFP10586 1907 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 BTBD19C9JJ37 291 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 CA12O43570 354 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 APPP05067 770 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 CETPP11597 493 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 MSX1P28360 303 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 CAP2P40123 477 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 INHBEP58166 350 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 INSM1Q01101 510 aaPredicted RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 CRHR2Q13324 411 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 SNAPC2Q13487 334 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 TMED8Q6PL24 325 aaPredicted RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 GADL1Q6ZQY3 521 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 TTC6Q86TZ1 520 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 SKAP1Q86WV1 359 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 CERS3Q8IU89 383 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 FOXP4Q8IVH2 680 aaPredicted RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 CCDC82Q8N4S0 544 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 TSEN2Q8NCE0 465 aaKnown RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 SLC44A5Q8NCS7 719 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 ZNF837Q96EG3 531 aaPredicted RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 HINFPQ9BQA5 517 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 GPAMQ9HCL2 828 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 PRDM10Q9NQV6 1147 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 SAGE1Q9NXZ1 904 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 HERC5Q9UII4 1024 aaKnown RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 NOVA2Q9UNW9 492 aaKnown RBP6.95□□□□□ -1.3
CDH13-206ENST00000562601 AFG3L2Q9Y4W6 797 aa6.95□□□□□ -1.3
CDH13-206ENST00000562601 SERTM1A2A2V5 107 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 GSG1L2A8MUP6 293 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms