RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 PIK3CDO00329 1044 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 POLR2DO15514 142 aaKnown RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 FOSP01100 380 aaPredicted RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 OR52Z1P0C646 297 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 PTPRAP18433 802 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 USP11P51784 963 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 USP14P54578 494 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 STX1AQ16623 288 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 UBE2SQ16763 222 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 USP50Q70EL3 339 aaPredicted RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 SH3RF1Q7Z6J0 888 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 CCDC84Q86UT8 332 aaPredicted RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 RNF214Q8ND24 703 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 CNNM3Q8NE01 707 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 FAM200AQ8TCP9 573 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 CRYGNQ8WXF5 182 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 SYMPKQ92797 1274 aaKnown RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 EPSTI1Q96J88 318 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 MTMR9Q96QG7 549 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 PPP1R9BQ96SB3 815 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 PYM1Q9BRP8 204 aaKnown RBP10.82□□□□□ -0.68
CDH13-205ENST00000562307 AS3MTQ9HBK9 375 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 ANO10Q9NW15 660 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 SSC5DA1L4H1 1573 aa10.82□□□□□ -0.68
CDH13-205ENST00000562307 CYP3A7-CYP3A51PA0A087WV96 503 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 A0A087X0B3 334 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 OPLAHO14841 1288 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 GRIN3BO60391 1043 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 NEMFO60524 1076 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 CCNT1O60563 726 aaKnown RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 USP2O75604 605 aaPredicted RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 SLFN14P0C7P3 912 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 FDX1P10109 184 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 GCFC2P16383 781 aaKnown RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 CYP3A7P24462 503 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 NLRP12P59046 1061 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 SNAP25P60880 206 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 E2F4Q16254 413 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 ANO6Q4KMQ2 910 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 NT5DC1Q5TFE4 455 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 PRAMEF18Q5VWM3 479 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 MOXD1Q6UVY6 613 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 PRPF38AQ8NAV1 312 aaKnown RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
CDH13-205ENST00000562307 SPATA20Q8TB22 786 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 DCPSQ96C86 337 aaKnown RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 PDLIM2Q96JY6 352 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 C12orf42Q96LP6 360 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 AK8Q96MA6 479 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 MBOAT7Q96N66 472 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 WRNIP1Q96S55 665 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 FEZ1Q99689 392 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 CCSER1Q9C0I3 900 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 SERTAD1Q9UHV2 236 aa10.81□□□□□ -0.68
CDH13-205ENST00000562307 HOOK1Q9UJC3 728 aaKnown RBP10.81□□□□□ -0.68
CDH13-205ENST00000562307 ATAD5Q96QE3 1844 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 GLTPD2A6NH11 291 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L15C9J2P7 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 C19orf81C9J6K1 198 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L13C9JLJ4 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 BACE1P56817 501 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 CCDC173Q0VFZ6 552 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 PDIA5Q14554 519 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 ZYXQ15942 572 aaKnown RBP10.8□□□□□ -0.68
CDH13-205ENST00000562307 USP17L6PQ6QN14 398 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 IQUBQ8NA54 791 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 ZNF280CQ8ND82 737 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
CDH13-205ENST00000562307 ZKSCAN4Q969J2 545 aaPredicted RBP10.8□□□□□ -0.68
CDH13-205ENST00000562307 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 CCDC34Q96HJ3 373 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 BPIFA3Q9BQP9 254 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 ANO3Q9BYT9 981 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 CBX8Q9HC52 389 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 PICK1Q9NRD5 415 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 FBXO28Q9NVF7 368 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 PNMA2Q9UL42 364 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 MRPL11Q9Y3B7 192 aaKnown RBP10.8□□□□□ -0.68
CDH13-205ENST00000562307 ABCB11O95342 1321 aa10.8□□□□□ -0.68
CDH13-205ENST00000562307 ICAM1P05362 532 aa10.79□□□□□ -0.68
CDH13-205ENST00000562307 CYP3A4P08684 503 aa10.79□□□□□ -0.68
CDH13-205ENST00000562307 CIITAP33076 1130 aa10.79□□□□□ -0.68
CDH13-205ENST00000562307 SREBF1P36956 1147 aa10.79□□□□□ -0.68
CDH13-205ENST00000562307 ZNF165P49910 485 aa10.79□□□□□ -0.68
CDH13-205ENST00000562307 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms