RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 PCDHA6Q9UN73 950 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 PCDHA8Q9Y5H6 950 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 SPDYE16A6NNV3 312 aaPredicted RBP12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 OPLAHO14841 1288 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 TOMM70O94826 608 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 NCLP19338 710 aaKnown RBP12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 GTF2A2P52657 109 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 NOM1Q5C9Z4 860 aaKnown RBP12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 EARS2Q5JPH6 523 aaKnown RBP12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 TEX2Q8IWB9 1127 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 REXO1Q8N1G1 1221 aaKnown RBP12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 RASGRP4Q8TDF6 673 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 CUL5Q93034 780 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 USP28Q96RU2 1077 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
AC009054.2-201ENST00000561956 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 GOLGA6L22H0YM25 854 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 FIBPO43427 364 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 CETPP11597 493 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 MRPL12P52815 198 aaKnown RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 OAZ1P54368 228 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 RILPL1Q5EBL4 403 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 KRT25Q7Z3Z0 450 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 SAPCD2Q86UD0 394 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 RASAL3Q86YV0 1011 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 AGBL1Q96MI9 1066 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 ASCC2Q9H1I8 757 aaPredicted RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 PSTPIP2Q9H939 334 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 RTEL1Q9NZ71 1219 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 TFIP11Q9UBB9 837 aaKnown RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 CFAP45Q9UL16 551 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 CCPG1Q9ULG6 757 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 MRPL11Q9Y3B7 192 aaKnown RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 TLL2Q9Y6L7 1015 aa12.42□□□□□ -0.42
AC009054.2-201ENST00000561956 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 MEIS2O14770 477 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 YEATS4O95619 227 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 YY1P25490 414 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 TRAPPC10P48553 1259 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 NASPP49321 788 aaPredicted RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 IRX3P78415 501 aaPredicted RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 FSTL1Q12841 308 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 UBE2SQ16763 222 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 LBX2Q6XYB7 198 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 PIK3AP1Q6ZUJ8 805 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 LEO1Q8WVC0 666 aaPredicted RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 BRI3BPQ8WY22 251 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 GDPD2Q9HCC8 539 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 BIN2Q9UBW5 565 aaPredicted RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 NOL7Q9UMY1 257 aaKnown RBP12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 SLC45A1Q9Y2W3 748 aa12.41□□□□□ -0.42
AC009054.2-201ENST00000561956 ELP1O95163 1332 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 CCL15-CCL14A0A0B4J2E2 113 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 PIK3CDO00329 1044 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 SLC10A3P09131 477 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 OSBPP22059 807 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 ZNF157P51786 506 aaPredicted RBP12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 HERVK_113P62684 666 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 GHRHRQ02643 423 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 NONOQ15233 471 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 CCL15Q16663 113 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 JAKMIP3Q5VZ66 844 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 ANO1Q5XXA6 986 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 RGMBQ6NW40 437 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 MB21D1Q8N884 522 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 RCOR1Q9UKL0 485 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 CLIC4Q9Y696 253 aa12.4□□□□□ -0.42
AC009054.2-201ENST00000561956 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 BTBD19C9JJ37 291 aa12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 WNT7AO00755 349 aa12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 ALAS1P13196 640 aa12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 PTMSP20962 102 aa12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 CEBPZQ03701 1054 aaKnown RBP12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
AC009054.2-201ENST00000561956 PTPAQ15257 358 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms