RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.22■□□□□ 0.35
SPG7-205ENST00000561945 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.22■□□□□ 0.35
SPG7-205ENST00000561945 NMT2O60551 498 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 PDE1AP54750 535 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
SPG7-205ENST00000561945 TNFAIP2Q03169 654 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 PWP2Q15269 919 aaKnown RBP17.22■□□□□ 0.35
SPG7-205ENST00000561945 GNASQ5JWF2 1037 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
SPG7-205ENST00000561945 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 HOMER2Q9NSB8 354 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 TTC28Q96AY4 2481 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 CABYRO75952 493 aa17.21■□□□□ 0.35
SPG7-205ENST00000561945 ICAM1P05362 532 aa17.21■□□□□ 0.35
SPG7-205ENST00000561945 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
SPG7-205ENST00000561945 TAPT1Q6NXT6 567 aa17.21■□□□□ 0.35
SPG7-205ENST00000561945 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
SPG7-205ENST00000561945 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.351e-11■□□□□ 10.4
SPG7-205ENST00000561945 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
SPG7-205ENST00000561945 ALAS1P13196 640 aa17.2■□□□□ 0.34
SPG7-205ENST00000561945 PPIGQ13427 754 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■□□□ 11.5
SPG7-205ENST00000561945 IQSEC1Q6DN90 963 aa17.2■□□□□ 0.34
SPG7-205ENST00000561945 RANBP6O60518 1105 aaKnown RBP17.19■□□□□ 0.34
SPG7-205ENST00000561945 FGAP02671 866 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 SMPD1P17405 629 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 MCMDC2Q4G0Z9 681 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 TMEM240Q5SV17 173 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 CCDC174Q6PII3 467 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 TLK2Q86UE8 772 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 MAFAQ8NHW3 353 aaPredicted RBP17.19■□□□□ 0.34
SPG7-205ENST00000561945 MYLIPQ8WY64 445 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 VTA1Q9NP79 307 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 LAMA4Q16363 1823 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 GRIN2DO15399 1336 aa17.19■□□□□ 0.34
SPG7-205ENST00000561945 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 A0A0D9SFI3 127 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 TLR3O15455 904 aaKnown RBP17.18■□□□□ 0.34
SPG7-205ENST00000561945 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
SPG7-205ENST00000561945 PCP11498 1178 aaKnown RBP17.18■□□□□ 0.34
SPG7-205ENST00000561945 DNAJB2P25686 324 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 BEX3Q00994 111 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
SPG7-205ENST00000561945 FSCN1Q16658 493 aaKnown RBP17.18■□□□□ 0.34
SPG7-205ENST00000561945 TMEM199Q8N511 208 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 TTC14Q96N46 770 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 TMEM47Q9BQJ4 181 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 CCPG1Q9ULG6 757 aa17.18■□□□□ 0.34
SPG7-205ENST00000561945 RBM47A0AV96 593 aaKnown RBP17.17■□□□□ 0.34
SPG7-205ENST00000561945 SNHG28P0DPA3 235 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 HSPD1P10809 573 aaKnown RBP17.17■□□□□ 0.34
SPG7-205ENST00000561945 CSF2RAP15509 400 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 AAMPQ13685 434 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 PSRC1Q6PGN9 363 aaPredicted RBP17.17■□□□□ 0.34
SPG7-205ENST00000561945 CXCL17Q6UXB2 119 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 FAM227BQ96M60 508 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 PNMA2Q9UL42 364 aa17.17■□□□□ 0.34
SPG7-205ENST00000561945 REV3LO60673 3130 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 FOSL2P15408 326 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 NT5C2P49902 561 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 SNAP25P60880 206 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 TTBK2Q6IQ55 1244 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 AP5M1Q9H0R1 490 aa17.16■□□□□ 0.34
SPG7-205ENST00000561945 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
SPG7-205ENST00000561945 ZEB2O60315 1214 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 PDHBP11177 359 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 ALDH5A1P51649 535 aaPredicted RBP17.15■□□□□ 0.34
SPG7-205ENST00000561945 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 GRIN2CQ14957 1233 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 DUSP28Q4G0W2 176 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 TMEM63BQ5T3F8 832 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 ZNF589Q86UQ0 364 aaPredicted RBP17.15■□□□□ 0.34
SPG7-205ENST00000561945 FBXO16Q8IX29 292 aaPredicted RBP17.15■□□□□ 0.34
SPG7-205ENST00000561945 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 VTI1AQ96AJ9 217 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 MAF1Q9H063 256 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 ZNF576Q9H609 170 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 IL23AQ9NPF7 189 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
SPG7-205ENST00000561945 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
SPG7-205ENST00000561945 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
SPG7-205ENST00000561945 GBF1Q92538 1859 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 WDR19Q8NEZ3 1342 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 CHD7Q9P2D1 2997 aa17.15■□□□□ 0.34
SPG7-205ENST00000561945 NFIBO00712 420 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 DYNC1LI2O43237 492 aaPredicted RBP17.14■□□□□ 0.33
SPG7-205ENST00000561945 EDNRBP24530 442 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 SLC16A2P36021 539 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 ZNF543Q08ER8 600 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
SPG7-205ENST00000561945 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms