RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 GBP3Q9H0R5 595 aa3.89□□□□□ -1.79
CHD9-204ENST00000561869 IMPACTQ9P2X3 320 aa3.89□□□□□ -1.79
CHD9-204ENST00000561869 APEX2Q9UBZ4 518 aa3.89□□□□□ -1.79
CHD9-204ENST00000561869 CGGBP1Q9UFW8 167 aaPredicted RBP3.89□□□□□ -1.79
CHD9-204ENST00000561869 ANKRD34BA5PLL1 514 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 OR14I1A6ND48 311 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 PPM1BO75688 479 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 TMEM253P0C7T8 217 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 PRKCAP17252 672 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 LAPTM5Q13571 262 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 KCNA10Q16322 511 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 HLA-DQA1Q5Y7H0 255 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 ADAT2Q7Z6V5 191 aaKnown RBP3.88□□□□□ -1.79
CHD9-204ENST00000561869 VPS37DQ86XT2 251 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 MCF2L2Q86YR7 1114 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 SLC43A3Q8NBI5 491 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 NLGN2Q8NFZ4 835 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 MICAL1Q8TDZ2 1067 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 GMLQ99445 158 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 SGPP1Q9BX95 441 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 TNFRSF12AQ9NP84 129 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 PODXL2Q9NZ53 605 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 KLHL14Q9P2G3 628 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 PRKAG3Q9UGI9 489 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 MBD1Q9UIS9 605 aaPredicted RBP3.88□□□□□ -1.79
CHD9-204ENST00000561869 SMG5Q9UPR3 1016 aaKnown RBP3.88□□□□□ -1.79
CHD9-204ENST00000561869 TAF6LQ9Y6J9 622 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 NCANO14594 1321 aa3.88□□□□□ -1.79
CHD9-204ENST00000561869 PRRG2O14669 202 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 SEMA7AO75326 666 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 VIPR1P32241 457 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 BUD31P41223 144 aaPredicted RBP3.87□□□□□ -1.79
CHD9-204ENST00000561869 ZNF143P52747 638 aaPredicted RBP3.87□□□□□ -1.79
CHD9-204ENST00000561869 DLG4P78352 724 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 CYP4F8P98187 520 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 CYP4F3Q08477 520 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 GRB10Q13322 594 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 CBX2Q14781 532 aaPredicted RBP3.87□□□□□ -1.79
CHD9-204ENST00000561869 NCAPHQ15003 741 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 DPY19L1Q2PZI1 675 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 CYP2R1Q6VVX0 501 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 AMIGO3Q86WK7 504 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 NAT16Q8N8M0 369 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 NUP43Q8NFH3 380 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 MRGPRX3Q96LB0 322 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 LGR4Q9BXB1 951 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 CNTD2Q9H8S5 307 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 ZNF408Q9H9D4 720 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 EMC9Q9Y3B6 208 aa3.87□□□□□ -1.79
CHD9-204ENST00000561869 C2orf71A6NGG8 1288 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 B2RBV5 119 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 STXBP3O00186 592 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 PPP1R11O60927 126 aaPredicted RBP3.86□□□□□ -1.79
CHD9-204ENST00000561869 SSBP05455 408 aaKnown RBP eCLIP3.86□□□□□ -1.79
CHD9-204ENST00000561869 INHBBP09529 407 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 SRSF3P84103 164 aaKnown RBP3.86□□□□□ -1.79
CHD9-204ENST00000561869 AMPD2Q01433 879 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 ARID5AQ03989 594 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 GNL2Q13823 731 aaKnown RBP3.86□□□□□ -1.79
CHD9-204ENST00000561869 TNNI3KQ59H18 835 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 EEF1DP3Q658K8 133 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 MRM1Q6IN84 353 aaKnown RBP3.86□□□□□ -1.79
CHD9-204ENST00000561869 C6orf15Q6UXA7 325 aaPredicted RBP3.86□□□□□ -1.79
CHD9-204ENST00000561869 FAM178BQ8IXR5 827 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 BVESQ8NE79 360 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 APBA2Q99767 749 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.86□□□□□ -1.79
CHD9-204ENST00000561869 ACTR10Q9NZ32 417 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
CHD9-204ENST00000561869 TCAF2A6NFQ2 919 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 B8ZZF3 427 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 E9PSI1 815 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 KCNH1O95259 989 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 TBC1D8O95759 1140 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 CAPNS1P04632 268 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 MPOP05164 745 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 L1CAMP32004 1257 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 ARL4AP40617 200 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 CDR1P51861 262 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 CORO7P57737 925 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 LINC00310P59036 64 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 RAB3GAP1Q15042 981 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 TMEM132EQ6IEE7 984 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 RPTNQ6XPR3 784 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 COPS5Q92905 334 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 PDLIM7Q9NR12 457 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 FBLN5Q9UBX5 448 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 SUGT1Q9Y2Z0 365 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 BACE2Q9Y5Z0 518 aa3.85□□□□□ -1.79
CHD9-204ENST00000561869 NUDT19A8MXV4 375 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 ARNTLO00327 626 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 ABLIM1O14639 778 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 SRGAP3O43295 1099 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 TBX1O43435 398 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 KLF4O43474 513 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 DBHP09172 617 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 DNAJA1P31689 397 aaKnown RBP3.84□□□□□ -1.79
CHD9-204ENST00000561869 MAPKAPK2P49137 400 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 SEPHS1P49903 392 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 EPHB3P54753 998 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms