RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZNF174Q15697 407 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SEPT7Q16181 437 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 CLEC16AQ2KHT3 1053 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CCDC38Q502W7 563 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CCDC92Q53HC0 331 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 NBPF12Q5TAG4 269 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 SAMD5Q5TGI4 173 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 MSL1Q68DK7 614 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 MZT2BQ6NZ67 158 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 XRRA1Q6P2D8 792 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 PGBD2Q6P3X8 592 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 RIPOR1Q6ZS17 1223 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 FAM43BQ6ZT52 329 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 HFE2Q6ZVN8 426 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 EPM2AIP1Q7L775 607 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 GRAMD1CQ8IYS0 662 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 C1orf162Q8NEQ5 155 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 ADCY4Q8NFM4 1077 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GPBAR1Q8TDU6 330 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 KLHL6Q8WZ60 621 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 HDAC2Q92769 488 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 GAL3ST3Q96A11 431 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GCC1Q96CN9 775 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TRIM11Q96F44 468 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TRMT2BQ96GJ1 504 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 TIGD1Q96MW7 591 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 FAM193BQ96PV7 902 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 EIF2AK1Q9BQI3 630 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 NUDT16L1Q9BRJ7 211 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 SLC26A6Q9BXS9 759 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GSX2Q9BZM3 304 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ZCCHC2Q9C0B9 1178 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 UBE2OQ9C0C9 1292 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 MTFR1LQ9H019 292 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.42□□□□□ -2.02
RTF1-207ENST00000561076 VPS11Q9H270 941 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 UNC45AQ9H3U1 944 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ZFAND3Q9H8U3 227 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 KIAA1586Q9HCI6 787 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SSU72Q9NP77 194 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 AAASQ9NRG9 546 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 RAD18Q9NS91 495 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 C14orf119Q9NWQ9 140 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 RRN3Q9NYV6 651 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 RTEL1Q9NZ71 1219 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 MARK1Q9P0L2 795 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 WHRNQ9P202 907 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 DDX20Q9UHI6 824 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 GTF2IRD1Q9UHL9 959 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 KCNG1Q9UIX4 513 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ADAM30Q9UKF2 790 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TPCN1Q9ULQ1 816 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 PDZRN3Q9UPQ7 1066 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TTLL3Q9Y4R7 772 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CTDP1Q9Y5B0 961 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 PCDHA9Q9Y5H5 950 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SNX13Q9Y5W8 968 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TACC3Q9Y6A5 838 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ITIH6Q6UXX5 1313 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 PRR36Q9H6K5 1346 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 A0A087WZG4 1122 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 A0A0G2JS52 829 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 A0A1W2PRQ8 180 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 TCRBV16S1A1N1A0A5B0 115 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 DCDC2BA2VCK2 349 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 BLACEA4D250 179 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 LRRC10BA6NIK2 292 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 DCDC2CA8MYV0 355 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 CHURC1-FNTBB4DL54 471 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 H7C1D1 291 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 K7ENM7 598 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SIAH2O43255 324 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ORC4O43929 436 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 KRT37O76014 449 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RHOBTB3O94955 611 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 MBD4O95243 580 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 F11P03951 625 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 IFIT1P09914 478 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 SRGAP2CP0DJJ0 459 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RBP3P10745 1247 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RHCEP18577 417 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ITGA6P23229 1130 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 POLD1P28340 1107 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SMARCA1P28370 1054 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 POLR2BP30876 1174 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 LSP1P33241 339 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 KRT20P35900 424 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ADCYAP1R1P41586 468 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 TECP42680 631 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 DNM2P50570 870 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 KCNQ4P56696 695 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RNF4P78317 190 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ATP11AP98196 1134 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RHDQ02161 417 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ICA1Q05084 483 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SPEM2Q0P670 501 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 MAP4K2Q12851 820 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SFSWAPQ12872 951 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 FOXC1Q12948 553 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms