RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	DCDC2C	A8MYV0	355 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	F13A1	P00488	732 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	ZC3H12A	Q5D1E8	599 aa	Known RBP	9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	SNAP47	Q5SQN1	464 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	TBC1D9B	Q66K14	1250 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	SCARA3	Q6AZY7	606 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	DYM	Q7RTS9	669 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	C2CD4A	Q8NCU7	369 aa	Predicted RBP	9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	FAM46A	Q96IP4	442 aa	Known RBP	9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	FMNL2	Q96PY5	1086 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	MIS18A	Q9NYP9	233 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	ACTL7B	Q9Y614	415 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	CEMIP	Q8WUJ3	1361 aa		9.32	□□□□□ -0.92
MARK3-223	ENST00000561071	ID3	Q02535	119 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	LRFN4	Q6PJG9	635 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	C12orf40	Q86WS4	652 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	C2CD5	Q86YS7	1000 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	ARMC10	Q8N2F6	343 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	ZNF296	Q8WUU4	475 aa	Predicted RBP	9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	RTF1	Q92541	710 aa	Known RBP	9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	TEX13A	Q9BXU3	409 aa	Predicted RBP	9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	NMRK2	Q9NPI5	230 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	CRIM1	Q9NZV1	1036 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	CARMIL3	Q8ND23	1372 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	UBR2	Q8IWV8	1755 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071	SYNGAP1	Q96PV0	1343 aa		9.31	□□□□□ -0.92
MARK3-223	ENST00000561071		A0A087WZG4	1122 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	PROC	P04070	461 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	ERCC5	P28715	1186 aa	Predicted RBP	9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	HNRNPU	Q00839	825 aa	Known RBP eCLIP	9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	GPAT2	Q6NUI2	795 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	FBXO27	Q8NI29	283 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	PLPPR2	Q96GM1	343 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	FANCD2OS	Q96PS1	177 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	TPSG1	Q9NRR2	321 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	RNF181	Q9P0P0	153 aa		9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	BRCA1	P38398	1863 aa	Known RBP	9.3	□□□□□ -0.92
MARK3-223	ENST00000561071	SIPA1L3	O60292	1781 aa	Predicted RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	AFDN	P55196	1824 aa	Known RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	FAM221A	A4D161	298 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	GAS2	O43903	313 aa	Known RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	CAMTA2	O94983	1202 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	IL6ST	P40189	918 aa	Predicted RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	PRELP	P51888	382 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	SGO2	Q562F6	1265 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	PPM1J	Q5JR12	505 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	WIPI1	Q5MNZ9	446 aa	Predicted RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	PRR5L	Q6MZQ0	368 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	GATAD2B	Q8WXI9	593 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	UTP4	Q969X6	686 aa	Known RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	TP53INP1	Q96A56	240 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	ELMO3	Q96BJ8	720 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	SPOCK3	Q9BQ16	436 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	THUMPD2	Q9BTF0	503 aa	Known RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	SPON2	Q9BUD6	331 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	KCNQ5	Q9NR82	932 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	DISC1	Q9NRI5	854 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	FAM105A	Q9NUU6	356 aa		9.29	□□□□□ -0.92
MARK3-223	ENST00000561071	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	9.29	□□□□□ -0.92
MARK3-223	ENST00000561071		H0YIN7	160 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	TLR3	O15455	904 aa	Known RBP	9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	GREM1	O60565	184 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	CILP	O75339	1184 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	ASPA	P45381	313 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	DOC2B	Q14184	412 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	TAF7	Q15545	349 aa	Predicted RBP	9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	CDPF1	Q6NVV7	123 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	CCDC84	Q86UT8	332 aa	Predicted RBP	9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	ZNF654	Q8IZM8	581 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	TTLL6	Q8N841	843 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	ZNF622	Q969S3	477 aa	Known RBP eCLIP	9.28	□□□□□ -0.92	6e-8	■□□□□ 9.6
MARK3-223	ENST00000561071	ACBD3	Q9H3P7	528 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	GSX1	Q9H4S2	264 aa	Predicted RBP	9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	HIF3A	Q9Y2N7	669 aa		9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	SUPT16H	Q9Y5B9	1047 aa	Known RBP	9.28	□□□□□ -0.92
MARK3-223	ENST00000561071	SNRPA1	P09661	255 aa	Known RBP	9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	BMP3	P12645	472 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	HSPA6	P17066	643 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	CRK	P46108	304 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	RPL6	Q02878	288 aa	Known RBP	9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	TTLL4	Q14679	1199 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	UVSSA	Q2YD98	709 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	KIAA0825	Q8IV33	1275 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	NGEF	Q8N5V2	710 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	EAF1	Q96JC9	268 aa	Predicted RBP	9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	MYRFL	Q96LU7	910 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	TGIF2	Q9GZN2	237 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	UBP1	Q9NZI7	540 aa		9.27	□□□□□ -0.93
MARK3-223	ENST00000561071	ARFGEF1	Q9Y6D6	1849 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	NRXN2	Q9P2S2	1712 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	PRAMEF27	A3QJZ7	478 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	GFRA2	O00451	464 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	MSTN	O14793	375 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	HTATSF1	O43719	755 aa	Known RBP	9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	HCLS1	P14317	486 aa	Predicted RBP	9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	RAB6A	P20340	208 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	USP11	P51784	963 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	ERVK-24	P63145	666 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	RING1	Q06587	406 aa		9.26	□□□□□ -0.93

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