RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 PCDHA12Q9UN75 941 aa10.85□□□□□ -0.67
TRPM1-212ENST00000560801 KNDC1Q76NI1 1749 aa10.85□□□□□ -0.67
TRPM1-212ENST00000560801 ZBTB5O15062 677 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PSAPP07602 524 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 BIRC3Q13489 604 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 SLFN12Q8IYM2 578 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 ASCC2Q9H1I8 757 aaPredicted RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 TNMDQ9H2S6 317 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 STAP2Q9UGK3 403 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PARP2Q9UGN5 583 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 hCG_1984214I3L0E3 225 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 SLC8A3P57103 927 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 GALNT17Q6IS24 598 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 ZNF713Q8N859 430 aaPredicted RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 DEFB118Q96PH6 123 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PPP1R16BQ96T49 567 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 TMEM39AQ9NV64 488 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 ZSWIM5Q9P217 1185 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 VWA3AA6NCI4 1184 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 RILPL1Q5EBL4 403 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 CLEC10AQ8IUN9 316 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 MAP2P11137 1827 aaKnown RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 NRXN3Q9Y4C0 1643 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PQBP1O60828 265 aaKnown RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 GH1P01241 217 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 SUPT20HL2P0C7V6 817 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 CPT1AP50416 773 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PLCD1P51178 756 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 PROCA1Q8NCQ7 364 aaPredicted RBP10.84□□□□□ -0.67
TRPM1-212ENST00000560801 SYNCQ9H7C4 482 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 POLR3EQ9NVU0 708 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 MTMR4Q9NYA4 1195 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 KCNJ14Q9UNX9 436 aa10.84□□□□□ -0.67
TRPM1-212ENST00000560801 NEMFO60524 1076 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 UPP2O95045 317 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 TRPC3Q13507 836 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 TTC38Q5R3I4 469 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 NEK8Q86SG6 692 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 CCDC65Q8IXS2 484 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 ACER1Q8TDN7 264 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 SENP6Q9GZR1 1112 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 DDX25Q9UHL0 483 aaKnown RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 AGTPBP1Q9UPW5 1226 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 CATSPER4Q7RTX7 472 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 ELF1P32519 619 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 PRMT2P55345 433 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 MTMR1Q13613 665 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 INF2Q27J81 1249 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 SV2BQ7L1I2 683 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 SESTD1Q86VW0 696 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 ZNF512BQ96KM6 892 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 FAM167AQ96KS9 214 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 P2RX7Q99572 595 aaKnown RBP10.83□□□□□ -0.68
TRPM1-212ENST00000560801 DEF6Q9H4E7 631 aa10.83□□□□□ -0.68
TRPM1-212ENST00000560801 GSG1L2A8MUP6 293 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 AFMP43652 599 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 FSIP1Q8NA03 581 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 ANO3Q9BYT9 981 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 GBP3Q9H0R5 595 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 GPR25O00155 361 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 PTPRAP18433 802 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 PTH1RQ03431 593 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 MTERF2Q49AM1 385 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 FKBP15Q5T1M5 1219 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 APOBEC3HQ6NTF7 200 aaKnown RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 ZNF589Q86UQ0 364 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 ZFP91Q96JP5 570 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 CEP170P1Q96L14 293 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 SHTN1A0MZ66 631 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 YDJCA8MPS7 323 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 MBD3O95983 291 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 VCAM1P19320 739 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 IGFBP4P22692 258 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 RDXP35241 583 aaKnown RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 FLT3LGP49771 235 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 PPP2R5AQ15172 486 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 AMIGO3Q86WK7 504 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 XPOTO43592 962 aaKnown RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 SERPINC1P01008 464 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 BFSP2Q13515 415 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 QRICH1Q2TAL8 776 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 TICAM2Q86XR7 235 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 SPATC1LQ9H0A9 340 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 LUC7LQ9NQ29 371 aaKnown RBP10.82□□□□□ -0.68
TRPM1-212ENST00000560801 XPNPEP3Q9NQH7 507 aa10.82□□□□□ -0.68
TRPM1-212ENST00000560801 H0YCG3 227 aa10.81□□□□□ -0.68
TRPM1-212ENST00000560801 CYP4A11Q02928 519 aa10.81□□□□□ -0.68
TRPM1-212ENST00000560801 MYCT1Q8N699 235 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms