RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 BICDL1Q6ZP65 573 aa19.82■□□□□ 0.76
TRPM1-211ENST00000560658 ARHGAP27Q6ZUM4 889 aa19.82■□□□□ 0.76
TRPM1-211ENST00000560658 NEDD1Q8NHV4 660 aa19.82■□□□□ 0.76
TRPM1-211ENST00000560658 GRAPLQ8TC17 118 aaPredicted RBP19.82■□□□□ 0.76
TRPM1-211ENST00000560658 GPKOWQ92917 476 aaPredicted RBP eCLIP19.82■□□□□ 0.76
TRPM1-211ENST00000560658 RRP36Q96EU6 259 aaKnown RBP19.82■□□□□ 0.76
TRPM1-211ENST00000560658 STK17AQ9UEE5 414 aa19.82■□□□□ 0.76
TRPM1-211ENST00000560658 TTC26A0AVF1 554 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 WTIPA6NIX2 430 aaPredicted RBP19.81■□□□□ 0.76
TRPM1-211ENST00000560658 EIF3CLB5ME19 914 aaKnown RBP19.81■□□□□ 0.76
TRPM1-211ENST00000560658 INF2Q27J81 1249 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 IQCEQ6IPM2 695 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 TRAPPC11Q7Z392 1133 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 NEK8Q86SG6 692 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 STAG2Q8N3U4 1231 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 RUBCNQ92622 972 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 CALML4Q96GE6 196 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 EIF3CQ99613 913 aaKnown RBP19.81■□□□□ 0.76
TRPM1-211ENST00000560658 SLF1Q9BQI6 1058 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 TMEM47Q9BQJ4 181 aa19.81■□□□□ 0.76
TRPM1-211ENST00000560658 SEC63Q9UGP8 760 aaKnown RBP19.81■□□□□ 0.76
TRPM1-211ENST00000560658 NAV1Q8NEY1 1877 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 TARSL2A2RTX5 802 aaKnown RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 NOVP48745 357 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 NAPAP54920 295 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 FKBP15Q5T1M5 1219 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 MEX3CQ5U5Q3 659 aaKnown RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 PAPD7Q5XG87 772 aaKnown RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 C16orf86Q6ZW13 317 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 ZSCAN29Q8IWY8 852 aaPredicted RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 CSGALNACT2Q8N6G5 542 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 ERGIC2Q96RQ1 377 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 TUBGCP2Q9BSJ2 902 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 TRIM9Q9C026 710 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 TMEM60Q9H2L4 133 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 VIPAS39Q9H9C1 493 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 PUF60Q9UHX1 559 aaKnown RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 RTCBQ9Y3I0 505 aaKnown RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 FLT1P17948 1338 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 PVALEFA0A1B0GWK0 134 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 KLRF2D3W0D1 207 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 KCNQ2O43526 872 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 VEGFAP15692 232 aaPredicted RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 RASA1P20936 1047 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 SH3RF3Q8TEJ3 882 aaPredicted RBP19.8■□□□□ 0.76
TRPM1-211ENST00000560658 RAB34Q9BZG1 259 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 TTYH3Q9C0H2 523 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 ST7Q9NRC1 585 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 L1RE1Q9UN81 338 aa19.8■□□□□ 0.76
TRPM1-211ENST00000560658 SLC26A4O43511 780 aa19.79■□□□□ 0.76
TRPM1-211ENST00000560658 TYW1BQ6NUM6 668 aa19.79■□□□□ 0.76
TRPM1-211ENST00000560658 FAM163AQ96GL9 167 aaPredicted RBP19.79■□□□□ 0.76
TRPM1-211ENST00000560658 TNRC6CQ9HCJ0 1690 aaKnown RBP19.78■□□□□ 0.76
TRPM1-211ENST00000560658 CYTH3O43739 400 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 PLCG1P19174 1290 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 HNRNPH3P31942 346 aaKnown RBP19.78■□□□□ 0.76
TRPM1-211ENST00000560658 PDE4DQ08499 809 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 MUM1L1Q5H9M0 696 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 PPP1R18Q6NYC8 613 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 KIAA1328Q86T90 577 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 DUSP9Q99956 384 aaKnown RBP19.78■□□□□ 0.76
TRPM1-211ENST00000560658 EDEM3Q9BZQ6 932 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 MED4Q9NPJ6 270 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 ANKIB1Q9P2G1 1089 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 C10orf71Q711Q0 1435 aa19.78■□□□□ 0.76
TRPM1-211ENST00000560658 GPR75-ASB3A0A0A6YYF3 556 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 TRIM21P19474 475 aaKnown RBP19.77■□□□□ 0.76
TRPM1-211ENST00000560658 TBC1D8BQ0IIM8 1120 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 TMEM266Q2M3C6 531 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 RASGRP4Q8TDF6 673 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 DYNLL2Q96FJ2 89 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 EYA3Q99504 573 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 EPC1Q9H2F5 836 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 STX8Q9UNK0 236 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 REXO2Q9Y3B8 237 aaKnown RBP19.77■□□□□ 0.76
TRPM1-211ENST00000560658 SAR1BQ9Y6B6 198 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 PLIN4Q96Q06 1357 aa19.77■□□□□ 0.76
TRPM1-211ENST00000560658 SMCO2A6NFE2 343 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 RNF225M0QZC1 329 aaPredicted RBP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 POLR3GO15318 223 aaPredicted RBP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 ATP2B4P23634 1241 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 RXRBP28702 533 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 FXR2P51116 673 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 ASIC1P78348 528 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 EVX2Q03828 476 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 PSMD2Q13200 908 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 SEPT2Q15019 361 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 CCDC122Q5T0U0 273 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 SV2BQ7L1I2 683 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 CCDC84Q86UT8 332 aaPredicted RBP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 TBC1D22AQ8WUA7 517 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 JAKMIP2Q96AA8 810 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 CNOT6LQ96LI5 555 aaKnown RBP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 CHP1Q99653 195 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 RTFDC1Q9BY42 306 aaPredicted RBP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 CWC15Q9P013 229 aaKnown RBP19.76■□□□□ 0.75
TRPM1-211ENST00000560658 TAF1P21675 1872 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 USP17L3A6NCW0 530 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 USP17L4A6NCW7 530 aa19.76■□□□□ 0.75
TRPM1-211ENST00000560658 TRIM49BA6NDI0 452 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms