RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CAPNS2Q96L46 248 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 ALG1Q9BT22 464 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 FOXP1Q9H334 677 aaPredicted RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 GBA2Q9HCG7 927 aaPredicted RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 VPS18Q9P253 973 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 SCAF8Q9UPN6 1271 aaKnown RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 BAG3O95817 575 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 FGAP02671 866 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 CHGBP05060 677 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 PLCG2P16885 1265 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 ZNF18P17022 549 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 PPP4CP60510 307 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 KRT83P78385 493 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 APBA1Q02410 837 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 MECOMQ03112 1051 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 BEND6Q5SZJ8 279 aaPredicted RBP9.6□□□□□ -0.87
CCDC33-209ENST00000560565 CYP4F22Q6NT55 531 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 ZNF662Q6ZS27 426 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 AFAP1L1Q8TED9 768 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 CCDC102AQ96A19 550 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 PRMT6Q96LA8 375 aaPredicted RBP9.6□□□□□ -0.87
CCDC33-209ENST00000560565 GSDMAQ96QA5 445 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 RIOK1Q9BRS2 568 aaKnown RBP9.6□□□□□ -0.87
CCDC33-209ENST00000560565 CRACR2AQ9BSW2 395 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 MRIQ9BWK5 157 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 TSGA10Q9BZW7 698 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 NAPBQ9H115 298 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 ATP8A2Q9NTI2 1148 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 TSKSQ9UJT2 592 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 L1RE1Q9UN81 338 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 NFE2L3Q9Y4A8 694 aa9.6□□□□□ -0.87
CCDC33-209ENST00000560565 MYH15Q9Y2K3 1946 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 BIN1O00499 593 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 FOXP2O15409 715 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 OPA1O60313 960 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 FDPSP14324 419 aaKnown RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 FECHP22830 423 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 NF2P35240 595 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 LIFRP42702 1097 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 CRKP46108 304 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 CORO7P57737 925 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 HDLBPQ00341 1268 aaKnown RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 SSRP1Q08945 709 aaKnown RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 MORC3Q14149 939 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 NR1I3Q14994 352 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 PRAMEF18Q5VWM3 479 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 STOX1Q6ZVD7 989 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 B4GALNT4Q76KP1 1039 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 SGMS1Q86VZ5 419 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 TMEM139Q8IV31 216 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 MB21D2Q8IYB1 491 aaPredicted RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 IFNL3Q8IZI9 196 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 TC2NQ8N9U0 490 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 NOC3LQ8WTT2 800 aaKnown RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 FERMT2Q96AC1 680 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 SNX27Q96L92 541 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 CEP89Q96ST8 783 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
CCDC33-209ENST00000560565 KRT23Q9C075 422 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 DEFB129Q9H1M3 183 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 VEZTQ9HBM0 779 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 FANCLQ9NW38 375 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 PCDHAC2Q9Y5I4 1007 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 SLC4A4Q9Y6R1 1079 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 NID2Q14112 1375 aa9.59□□□□□ -0.87
CCDC33-209ENST00000560565 MROH7-TTC4A0A0A0MT08 1334 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 ANO9A1A5B4 782 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 ERICH2A1L162 156 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 GSG1L2A8MUP6 293 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 GOLGA8KD6RF30 607 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 ZBTB43O43298 467 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 APPP05067 770 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 MYL1P05976 194 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 PRDX5P30044 214 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 MAP2K2P36507 400 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 FKBP1BP68106 108 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 MAP2K1Q02750 393 aaPredicted RBP9.58□□□□□ -0.88
CCDC33-209ENST00000560565 TTLL12Q14166 644 aaPredicted RBP9.58□□□□□ -0.88
CCDC33-209ENST00000560565 GRIK5Q16478 980 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 RGMBQ6NW40 437 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 NOSTRINQ8IVI9 506 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 C10orf67Q8IYJ2 551 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 LCORLQ8N3X6 602 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 IGSF22Q8N9C0 903 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 TEKT1Q969V4 418 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 DHX58Q96C10 678 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 MYCBPQ99417 103 aaPredicted RBP9.58□□□□□ -0.88
CCDC33-209ENST00000560565 RNF41Q9H4P4 317 aaPredicted RBP9.58□□□□□ -0.88
CCDC33-209ENST00000560565 ARMT1Q9H993 441 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 PDE11AQ9HCR9 933 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 ANAPC4Q9UJX5 808 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 JRKLQ9Y4A0 524 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 PCDHA5Q9Y5H7 936 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms