RNA–Protein interactions for RNA: ENST00000560153.2

LINC00052-201, long intergenic non-protein coding RNA 52, humanhuman

TSL 2 BASIC

Gene LINC00052, Length 1,966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052-201ENST00000560153 UBXN1Q04323 297 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
LINC00052-201ENST00000560153 VPS16Q9H269 839 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 TAB2Q9NYJ8 693 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 HPCAL4Q9UM19 191 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 TNKSO95271 1327 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 XDHP47989 1333 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
LINC00052-201ENST00000560153 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 VGLL3A8MV65 326 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
LINC00052-201ENST00000560153 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
LINC00052-201ENST00000560153 CPP00450 1065 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 RPN1P04843 607 aaKnown RBP13.04□□□□□ -0.32
LINC00052-201ENST00000560153 KCNB1Q14721 858 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 PKN1Q16512 942 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
LINC00052-201ENST00000560153 PDXDC2PQ6P474 469 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 MB21D1Q8N884 522 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
LINC00052-201ENST00000560153 COG1Q8WTW3 980 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 LCMT1Q9UIC8 334 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 USP21Q9UK80 565 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 DUOX1Q9NRD9 1551 aa13.04□□□□□ -0.32
LINC00052-201ENST00000560153 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 EIF3CLB5ME19 914 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 NOP2P46087 812 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 DNM2P50570 870 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 ITIH3Q06033 890 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 VPS72Q15906 364 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 PLEKHG6Q3KR16 790 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 FAM114A1Q8IWE2 563 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 CCDC47Q96A33 483 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 EIF3CQ99613 913 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 INCENPQ9NQS7 918 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 VPS54Q9P1Q0 977 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 PDS5AQ29RF7 1337 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 A0A0U1RQJ8 604 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 NT5C2P49902 561 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 MEA1Q16626 185 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 CCDC122Q5T0U0 273 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 NCAPH2Q6IBW4 605 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 CAGE1Q8TC20 777 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 ATRIPQ8WXE1 791 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 JAKMIP2Q96AA8 810 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 YY1AP1Q9H869 796 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
LINC00052-201ENST00000560153 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
LINC00052-201ENST00000560153 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.32
LINC00052-201ENST00000560153 HOXA2O43364 376 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 SHOX2O60902 331 aaPredicted RBP13.02□□□□□ -0.32
LINC00052-201ENST00000560153 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.32
LINC00052-201ENST00000560153 VAMP1P23763 118 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 CALML3P27482 149 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 CDK17Q00537 523 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 FUT2Q10981 343 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 PTGDRQ13258 359 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 RASGRF1Q13972 1273 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 ZNF174Q15697 407 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 IFIT1BQ5T764 474 aaKnown RBP13.02□□□□□ -0.32
LINC00052-201ENST00000560153 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 SMYD4Q8IYR2 804 aaPredicted RBP13.02□□□□□ -0.32
LINC00052-201ENST00000560153 ADAMTS19Q8TE59 1207 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.32
LINC00052-201ENST00000560153 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
LINC00052-201ENST00000560153 PSMA7O14818 248 aa13.01□□□□□ -0.33
LINC00052-201ENST00000560153 OPA1O60313 960 aa13.01□□□□□ -0.33
LINC00052-201ENST00000560153 ADSSL1Q8N142 457 aa13.01□□□□□ -0.33
LINC00052-201ENST00000560153 ATL2Q8NHH9 583 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms