RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ALYREFQ86V81 257 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 AMOTL1Q8IY63 956 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 FAM133AQ8N9E0 248 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 CHST13Q8NET6 341 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 HLA-CQ95604 372 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 KIFC2Q96AC6 838 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 CD320Q9NPF0 282 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 NYAP2Q9P242 653 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 FBXO40Q9UH90 709 aa15.38■□□□□ 0.05
RABGGTA-213ENST00000560127 DYNC1LI2O43237 492 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-213ENST00000560127 SMPD1P17405 629 aa15.37■□□□□ 0.05
RABGGTA-213ENST00000560127 ARNTL2Q8WYA1 636 aa15.37■□□□□ 0.05
RABGGTA-213ENST00000560127 ALDH8A1Q9H2A2 487 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-213ENST00000560127 DDX49Q9Y6V7 483 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-213ENST00000560127 MYO7AQ13402 2215 aa15.37■□□□□ 0.05
RABGGTA-213ENST00000560127 C5orf42Q9H799 3197 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 SOWAHBA6NEL2 793 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 PI4K2BG5E9Z4 385 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 ZEB2O60315 1214 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 PFKMP08237 780 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 RASA1P20936 1047 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 OAZ1P54368 228 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 TAP1Q03518 808 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 DEFB128Q7Z7B8 93 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 AP5M1Q9H0R1 490 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 PDGFCQ9NRA1 345 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 CTDP1Q9Y5B0 961 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 SLC4A4Q9Y6R1 1079 aa15.36■□□□□ 0.05
RABGGTA-213ENST00000560127 LPXNO60711 386 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 CYP2C9P11712 490 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 RLBP1P12271 317 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 GRB10Q13322 594 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 SLC9A7Q96T83 725 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 A1CFQ9NQ94 594 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 PAG1Q9NWQ8 432 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 SIP14410 1827 aa15.35■□□□□ 0.05
RABGGTA-213ENST00000560127 IGKV6D-41A0A0C4DH26 115 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 ASB14A6NK59 587 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 TAPT1Q6NXT6 567 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 PHOSPHO2Q8TCD6 241 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 ACAD9Q9H845 621 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 FEM1BQ9UK73 627 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 Q9Y3F1 56 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 TNKSO95271 1327 aa15.34■□□□□ 0.05
RABGGTA-213ENST00000560127 ACTN1P12814 892 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 IQSEC1Q6DN90 963 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 EEPD1Q7L9B9 569 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 HERC6Q8IVU3 1022 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 FBXO16Q8IX29 292 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 STK11IPQ8N1F8 1099 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 MKL1Q969V6 931 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 BOLA2Q9H3K6 86 aa15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-213ENST00000560127 SUPT20HL2P0C7V6 817 aa15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 CLASRPQ8N2M8 674 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 PUS7LQ9H0K6 701 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 RNF146Q9NTX7 359 aa15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 COG6Q9Y2V7 657 aa15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 ZNF536O15090 1300 aa15.32■□□□□ 0.04
RABGGTA-213ENST00000560127 PRR33A8MZF0 331 aa15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 RFC2P35250 354 aa15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 SBK1Q52WX2 424 aa15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 HSP90AB4PQ58FF6 505 aa15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 CEP95Q96GE4 821 aa15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 MKNK2Q9HBH9 465 aa15.31■□□□□ 0.04
RABGGTA-213ENST00000560127 USP34Q70CQ2 3546 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 IQCF3P0C7M6 154 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 FDX1P10109 184 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 PURAQ00577 322 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 TRERF1Q96PN7 1200 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 HAUS7Q99871 368 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
RABGGTA-213ENST00000560127 ZDBF2Q9HCK1 2354 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 CFAP54Q96N23 3096 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 LCHNA4D1U4 455 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 GSG1L2A8MUP6 293 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 BMP3P12645 472 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 ATP5JP18859 108 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 MRE11P49959 708 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 DUSP28Q4G0W2 176 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 RPAP2Q8IXW5 612 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-213ENST00000560127 GJD3Q8N144 294 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms