RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MANSC4A6NHS7 340 aaPredicted RBP10.84□□□□□ -0.67
HERC1-206ENST00000559996 M0R2N6 131 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 PDHXO00330 501 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 ATP2A1O14983 1001 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 CYP2C8P10632 490 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 VEGFBP49765 207 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 INHBEP58166 350 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 CPLX2Q6PUV4 134 aaKnown RBP10.84□□□□□ -0.67
HERC1-206ENST00000559996 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 FBXO18Q8NFZ0 1043 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
HERC1-206ENST00000559996 CAPNS2Q96L46 248 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 AGBL1Q96MI9 1066 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 ALG1Q9BT22 464 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 PHF20Q9BVI0 1012 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 TMEM121BQ9BXQ6 578 aaPredicted RBP10.84□□□□□ -0.67
HERC1-206ENST00000559996 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
HERC1-206ENST00000559996 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
HERC1-206ENST00000559996 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
HERC1-206ENST00000559996 EDIL3O43854 480 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 FDX1P10109 184 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 HERVK_113P62684 666 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 LARP1BQ659C4 914 aaKnown RBP10.83□□□□□ -0.68
HERC1-206ENST00000559996 KRT40Q6A162 431 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 TRIM22Q8IYM9 498 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 CLEC4DQ8WXI8 215 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 TBC1D5Q92609 795 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
HERC1-206ENST00000559996 SH3GLB2Q9NR46 395 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 VPS54Q9P1Q0 977 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 KCNJ14Q9UNX9 436 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 MTMR6Q9Y217 621 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 A0A0G2JMZ2 1700 aa10.83□□□□□ -0.68
HERC1-206ENST00000559996 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
HERC1-206ENST00000559996 KIF28PB7ZC32 967 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 BRD1O95696 1058 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 ICAM1P05362 532 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 C1QTNF8P60827 252 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
HERC1-206ENST00000559996 CCDC174Q6PII3 467 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 FBXO11Q86XK2 927 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 OXER1Q8TDS5 423 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 TNFRSF25Q93038 417 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 ZMYND12Q9H0C1 365 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 ZCCHC17Q9NP64 241 aaKnown RBP10.82□□□□□ -0.68
HERC1-206ENST00000559996 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
HERC1-206ENST00000559996 PCDHA1Q9Y5I3 950 aa10.82□□□□□ -0.68
HERC1-206ENST00000559996 ESYT2A0FGR8 921 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 MEIS2O14770 477 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 STX6O43752 255 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 ZBED4O75132 1171 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 MMP1P03956 469 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 OSBPP22059 807 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
HERC1-206ENST00000559996 FOSBP53539 338 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 OAZ1P54368 228 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 GUCY1B3Q02153 619 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 GHRHRQ02643 423 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 NOGQ13253 232 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
HERC1-206ENST00000559996 MUM1L1Q5H9M0 696 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 EARS2Q5JPH6 523 aaKnown RBP10.81□□□□□ -0.68
HERC1-206ENST00000559996 CPXCR1Q8N123 301 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 DNAJC5GQ8N7S2 189 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 FAM184AQ8NB25 1140 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 WASF1Q92558 559 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 C8orf76Q96K31 380 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 AMNQ9BXJ7 453 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 ISY1Q9ULR0 285 aaKnown RBP10.81□□□□□ -0.68
HERC1-206ENST00000559996 RABGAP1Q9Y3P9 1069 aa10.81□□□□□ -0.68
HERC1-206ENST00000559996 SMCO2A6NFE2 343 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 HSP90AA1P07900 732 aaKnown RBP10.8□□□□□ -0.68
HERC1-206ENST00000559996 BCRP11274 1271 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 HSPA6P17066 643 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.68
HERC1-206ENST00000559996 STAT3P40763 770 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 IRX3P78415 501 aaPredicted RBP10.8□□□□□ -0.68
HERC1-206ENST00000559996 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
HERC1-206ENST00000559996 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.68
HERC1-206ENST00000559996 USH1GQ495M9 461 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 C17orf99Q6UX52 265 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
HERC1-206ENST00000559996 HEATR3Q7Z4Q2 680 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 RIOX2Q8IUF8 465 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 FAM177A1Q8N128 213 aaPredicted RBP10.8□□□□□ -0.68
HERC1-206ENST00000559996 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
HERC1-206ENST00000559996 MB21D1Q8N884 522 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 DAGLBQ8NCG7 672 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 MORF4L1Q9UBU8 362 aa10.8□□□□□ -0.68
HERC1-206ENST00000559996 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
HERC1-206ENST00000559996 NFIBO00712 420 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 MAP2K2P36507 400 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 SREBF2Q12772 1141 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 RESTQ13127 1097 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 GRM1Q13255 1194 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 NR5A1Q13285 461 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms