RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PTCHD1Q96NR3 888 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 SGPP1Q9BX95 441 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 GCM1Q9NP62 436 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 TNFRSF12AQ9NP84 129 aa6.13□□□□□ -1.43
SPG11-218ENST00000559754 MBD1Q9UIS9 605 aaPredicted RBP6.13□□□□□ -1.43
SPG11-218ENST00000559754 EPHX1P07099 455 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 SDHBP21912 280 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 CEBPAP49715 358 aaPredicted RBP6.12□□□□□ -1.43
SPG11-218ENST00000559754 GRB10Q13322 594 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 GNL2Q13823 731 aaKnown RBP6.12□□□□□ -1.43
SPG11-218ENST00000559754 CBX2Q14781 532 aaPredicted RBP6.12□□□□□ -1.43
SPG11-218ENST00000559754 NR1I3Q14994 352 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 RCSD1Q6JBY9 416 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 VHLLQ6RSH7 139 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 LCNL1Q6ZST4 164 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 TMEM151BQ8IW70 566 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 CRACR2BQ8N4Y2 399 aaPredicted RBP6.12□□□□□ -1.43
SPG11-218ENST00000559754 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 RCC1LQ96I51 464 aaKnown RBP6.12□□□□□ -1.43
SPG11-218ENST00000559754 SIGLEC10Q96LC7 697 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 SUGT1Q9Y2Z0 365 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 IRAK3Q9Y616 596 aa6.12□□□□□ -1.43
SPG11-218ENST00000559754 ANKRD34BA5PLL1 514 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 N4BP3O15049 544 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 IFNGR1P15260 489 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 ATF4P18848 351 aaPredicted RBP6.11□□□□□ -1.43
SPG11-218ENST00000559754 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
SPG11-218ENST00000559754 L1CAMP32004 1257 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 AMPD2Q01433 879 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 MVKQ03426 396 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 ARHGEF39Q8N4T4 335 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 KLHL6Q8WZ60 621 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 KCTD3Q9Y597 815 aa6.11□□□□□ -1.43
SPG11-218ENST00000559754 TRBV23OR9-2A0A075B6M9 112 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 NUDT19A8MXV4 375 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 AURKAO14965 403 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 SEPHS1P49903 392 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 ZNF143P52747 638 aaPredicted RBP6.1□□□□□ -1.43
SPG11-218ENST00000559754 NCAPHQ15003 741 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 TCERG1LQ5VWI1 586 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 PAQR3Q6TCH7 311 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 TMC6Q7Z403 805 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 NLGN2Q8NFZ4 835 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 FGD4Q96M96 766 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 APBA2Q99767 749 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 IRF2BPLQ9H1B7 796 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 CNTD2Q9H8S5 307 aa6.1□□□□□ -1.43
SPG11-218ENST00000559754 CGGBP1Q9UFW8 167 aaPredicted RBP6.1□□□□□ -1.43
SPG11-218ENST00000559754 SRGAP3O43295 1099 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 CYBBP04839 570 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 SSBP05455 408 aaKnown RBP eCLIP6.09□□□□□ -1.43
SPG11-218ENST00000559754 TCF3P15923 654 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 MAPKAPK2P49137 400 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 BICRALQ6AI39 1079 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 POMZP3Q6PJE2 187 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 ZC3H14Q6PJT7 736 aaKnown RBP6.09□□□□□ -1.43
SPG11-218ENST00000559754 RPTNQ6XPR3 784 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 NPM2Q86SE8 214 aaKnown RBP6.09□□□□□ -1.43
SPG11-218ENST00000559754 MZB1Q8WU39 189 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 BACE2Q9Y5Z0 518 aa6.09□□□□□ -1.43
SPG11-218ENST00000559754 C2orf71A6NGG8 1288 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 STXBP3O00186 592 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 VAMP4O75379 141 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 DPY19L1Q2PZI1 675 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 LDHDQ86WU2 507 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 FAM169BQ8N8A8 192 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 SUSD2Q9UGT4 822 aa6.08□□□□□ -1.44
SPG11-218ENST00000559754 NOP56O00567 594 aaKnown RBP6.07□□□□□ -1.44
SPG11-218ENST00000559754 IRS4O14654 1257 aaPredicted RBP6.07□□□□□ -1.44
SPG11-218ENST00000559754 DBHP09172 617 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 MSL3P1P0C860 447 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 PFKLP17858 780 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 PI3P19957 117 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 CDR1P51861 262 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 EPHB3P54753 998 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 SSPNQ14714 243 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
SPG11-218ENST00000559754 CABP7Q86V35 215 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 BVESQ8NE79 360 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 RAPGEFL1Q9UHV5 662 aa6.07□□□□□ -1.44
SPG11-218ENST00000559754 PAMP19021 973 aa6.06□□□□□ -1.44
SPG11-218ENST00000559754 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
SPG11-218ENST00000559754 MCMBPQ9BTE3 642 aa6.06□□□□□ -1.44
SPG11-218ENST00000559754 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
SPG11-218ENST00000559754 DBR1Q9UK59 544 aaKnown RBP6.06□□□□□ -1.44
SPG11-218ENST00000559754 EMC9Q9Y3B6 208 aa6.06□□□□□ -1.44
SPG11-218ENST00000559754 NPHP3-ACAD11A0A0J9YXS1 232 aa6.05□□□□□ -1.44
SPG11-218ENST00000559754 TACR1P25103 407 aa6.05□□□□□ -1.44
SPG11-218ENST00000559754 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.05□□□□□ -1.44
SPG11-218ENST00000559754 PCDHA5Q9Y5H7 936 aa6.05□□□□□ -1.44
SPG11-218ENST00000559754 F8W031 263 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms