RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 GBF1Q92538 1859 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 MOXD2PA6NHM9 499 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 K7ELQ4 463 aaPredicted RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 NMT2O60551 498 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 TTLL1O95922 423 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 ASGR1P07306 291 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 ZFYP08048 801 aaPredicted RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 BMP3P12645 472 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 GNAT2P19087 354 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 TDO2P48775 406 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 OAZ1P54368 228 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 GJA9P57773 515 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 NUCB2P80303 420 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 TFAP4Q01664 338 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 KLHL40Q2TBA0 621 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 SLFN13Q68D06 897 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 ARMCX2Q7L311 632 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 CHD1LQ86WJ1 897 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 CHMP4CQ96CF2 233 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 DDX11Q96FC9 970 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 AGBL1Q96MI9 1066 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 NAP1L5Q96NT1 182 aaPredicted RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.3
USP3-212ENST00000559276 STARD7Q9NQZ5 370 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 ZHX1Q9UKY1 873 aaPredicted RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 FAM184BQ9ULE4 1060 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 GNEQ9Y223 722 aaKnown RBP6.9□□□□□ -1.3
USP3-212ENST00000559276 CNPY2Q9Y2B0 182 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 GRIN2DO15399 1336 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 TTC41PQ6P2S7 1318 aa6.9□□□□□ -1.3
USP3-212ENST00000559276 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 TMEM232C9JQI7 657 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 ZBED4O75132 1171 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 TIMP1P01033 207 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 CD4P01730 458 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 APPP05067 770 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 FGRP09769 529 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 RAG1P15918 1043 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 MCM5P33992 734 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 SNAP25P60880 206 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 FPGSQ05932 587 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 CTDSPL2Q05D32 466 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 PPARAQ07869 468 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 RABEP1Q15276 862 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 CCDC129Q6ZRS4 1044 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 MTERF4Q7Z6M4 381 aaKnown RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 FAM126BQ8IXS8 530 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 ZNF444Q8N0Y2 327 aaPredicted RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 USP38Q8NB14 1042 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 SLC43A3Q8NBI5 491 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 CHST13Q8NET6 341 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 MAFAQ8NHW3 353 aaPredicted RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 TNPO1Q92973 898 aaKnown RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 ABHD16BQ9H3Z7 469 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 A1CFQ9NQ94 594 aaKnown RBP6.89□□□□□ -1.31
USP3-212ENST00000559276 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 TMEM39AQ9NV64 488 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 ELP1O95163 1332 aa6.89□□□□□ -1.31
USP3-212ENST00000559276 UMODL1Q5DID0 1318 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 GRXCR1A8MXD5 290 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 ARVCFO00192 962 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 PLA2G6O60733 806 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 CDC45O75419 566 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 C6orf222P0C671 652 aaPredicted RBP6.88□□□□□ -1.31
USP3-212ENST00000559276 TSPY3P0CV98 308 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 TSPY8P0CW00 308 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 CSF2RAP15509 400 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 SMPD1P17405 629 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 MCCP23508 829 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 DNAJB2P25686 324 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 PBX2P40425 430 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 ZNF445P59923 1031 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 BEX3Q00994 111 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 TMEM240Q5SV17 173 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 MFSD5Q6N075 450 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 ZSCAN30Q86W11 494 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 ANKRD35Q8N283 1001 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 STAG1Q8WVM7 1258 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 ACAD9Q9H845 621 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 HOMER2Q9NSB8 354 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 RNF146Q9NTX7 359 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms