RNA–Protein interactions for RNA: ENST00000559207.1

CPNE6-212, Transcript of copine 6, humanhuman

TSL 3

Gene CPNE6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-212ENST00000559207 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 PTGS1P23219 599 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 HAND2P61296 217 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
CPNE6-212ENST00000559207 BEX3Q00994 111 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 FPGSQ05932 587 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 CCDC96Q2M329 555 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 B4GALNT3Q6L9W6 998 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 TICAM2Q86XR7 235 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 VTI1AQ96AJ9 217 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
CPNE6-212ENST00000559207 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 TCP11L1Q9NUJ3 509 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 TBX21Q9UL17 535 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 UNC80Q8N2C7 3258 aa13.69□□□□□ -0.22
CPNE6-212ENST00000559207 ARVCFO00192 962 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 TIMP1P01033 207 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 ICAM1P05362 532 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
CPNE6-212ENST00000559207 TMEM63BQ5T3F8 832 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 BTNL9Q6UXG8 535 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 NSMFQ6X4W1 530 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 NOL8Q76FK4 1167 aaKnown RBP13.68□□□□□ -0.22
CPNE6-212ENST00000559207 RILPL2Q969X0 211 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 RNPC3Q96LT9 517 aaKnown RBP13.68□□□□□ -0.22
CPNE6-212ENST00000559207 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
CPNE6-212ENST00000559207 RANBP17Q9H2T7 1088 aaKnown RBP13.68□□□□□ -0.22
CPNE6-212ENST00000559207 GPCPD1Q9NPB8 672 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
CPNE6-212ENST00000559207 GNEQ9Y223 722 aaKnown RBP13.68□□□□□ -0.22
CPNE6-212ENST00000559207 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
CPNE6-212ENST00000559207 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 A0A0U1RQG5 324 aaPredicted RBP13.67□□□□□ -0.22
CPNE6-212ENST00000559207 IGHDP01880 384 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 SMPD1P17405 629 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 SDSP20132 328 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
CPNE6-212ENST00000559207 SYDE2Q5VT97 1194 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 TAPT1Q6NXT6 567 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 EEPD1Q7L9B9 569 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 FAM126BQ8IXS8 530 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 TTYH1Q9H313 450 aaPredicted RBP13.67□□□□□ -0.22
CPNE6-212ENST00000559207 EYSQ5T1H1 3165 aa13.67□□□□□ -0.22
CPNE6-212ENST00000559207 ZMYM6O95789 1325 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 MROH7Q68CQ1 1323 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 NFIBO00712 420 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
CPNE6-212ENST00000559207 PDHBP11177 359 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 AAMPQ13685 434 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 CXCL17Q6UXB2 119 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 MFSD6Q6ZSS7 791 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 TLK2Q86UE8 772 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 CHD1LQ86WJ1 897 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 FBXO16Q8IX29 292 aaPredicted RBP13.66□□□□□ -0.22
CPNE6-212ENST00000559207 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
CPNE6-212ENST00000559207 TTC14Q96N46 770 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
CPNE6-212ENST00000559207 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
CPNE6-212ENST00000559207 CD4P01730 458 aa13.65□□□□□ -0.22
CPNE6-212ENST00000559207 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
CPNE6-212ENST00000559207 NUCB1Q02818 461 aa13.65□□□□□ -0.22
CPNE6-212ENST00000559207 FSCN1Q16658 493 aaKnown RBP13.65□□□□□ -0.22
CPNE6-212ENST00000559207 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
CPNE6-212ENST00000559207 CLEC4DQ8WXI8 215 aa13.65□□□□□ -0.22
CPNE6-212ENST00000559207 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.65□□□□□ -0.22
CPNE6-212ENST00000559207 AP5M1Q9H0R1 490 aa13.65□□□□□ -0.22
CPNE6-212ENST00000559207 OSBPL3Q9H4L5 887 aa13.65□□□□□ -0.22
CPNE6-212ENST00000559207 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 TLR3O15455 904 aaKnown RBP13.64□□□□□ -0.23
CPNE6-212ENST00000559207 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 CSF2RAP15509 400 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 ITGA7Q13683 1181 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPNE6-212ENST00000559207 MYLIPQ8WY64 445 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 ZKSCAN3Q9BRR0 538 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 PPP1R12CQ9BZL4 782 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 Q9Y3F1 56 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 LCTP09848 1927 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 NEDD4P46934 1319 aa13.64□□□□□ -0.23
CPNE6-212ENST00000559207 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.63□□□□□ -0.23
CPNE6-212ENST00000559207 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.63□□□□□ -0.23
CPNE6-212ENST00000559207 PTPDC1A2A3K4 754 aa13.63□□□□□ -0.23
CPNE6-212ENST00000559207 ZNF213O14771 459 aa13.63□□□□□ -0.23
CPNE6-212ENST00000559207 CABYRO75952 493 aa13.63□□□□□ -0.23
CPNE6-212ENST00000559207 ALDH5A1P51649 535 aaPredicted RBP13.63□□□□□ -0.23
CPNE6-212ENST00000559207 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
CPNE6-212ENST00000559207 PPIGQ13427 754 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms