RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 C1QTNF1Q9BXJ1 281 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 HIPK3Q9H422 1215 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 SCN10AQ9Y5Y9 1956 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 F5H6K3 240 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 NDUFB10O96000 172 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 POU3F3P20264 500 aaPredicted RBP13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 PDE1AP54750 535 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 CCL23P55773 120 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 KLRC3Q07444 240 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 IL27Q8NEV9 243 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 LNPKQ9C0E8 428 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 MTIF3Q9H2K0 278 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 MKNK2Q9HBH9 465 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 RAVER2Q9HCJ3 691 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 EPB41L4AQ9HCS5 686 aaPredicted RBP13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 NYAP2Q9P242 653 aa13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 GNEQ9Y223 722 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
CHRNA3-205ENST00000559080 B4GALT4O60513 344 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 RASA1P20936 1047 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 PTGS1P23219 599 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 CNTN2Q02246 1040 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 ITGA7Q13683 1181 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 ZMYM1Q5SVZ6 1142 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 STK11IPQ8N1F8 1099 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 ANKRD35Q8N283 1001 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 LRFN3Q9BTN0 628 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 NAPBQ9H115 298 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 PCDHA11Q9Y5I1 949 aa13.32□□□□□ -0.28
CHRNA3-205ENST00000559080 PATL2C9JE40 543 aaKnown RBP13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 RFXAPO00287 272 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 TNFAIP2Q03169 654 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 MICALL1Q8N3F8 863 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 AGBL1Q96MI9 1066 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 MTCH2Q9Y6C9 303 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 MUC6Q6W4X9 2439 aa13.31□□□□□ -0.28
CHRNA3-205ENST00000559080 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 ZBED4O75132 1171 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 CABYRO75952 493 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 AAK1Q2M2I8 961 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 SCLYQ96I15 445 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 TRPV6Q9H1D0 765 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 FBXO40Q9UH90 709 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 SLC4A7Q9Y6M7 1214 aa13.3□□□□□ -0.28
CHRNA3-205ENST00000559080 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 TLL1O43897 1013 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 SMPD1P17405 629 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 OAZ1P54368 228 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 PDE4BQ07343 736 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 KRT40Q6A162 431 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 TLK2Q86UE8 772 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 CHD1LQ86WJ1 897 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 RPUSD2Q8IZ73 545 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 MKL1Q969V6 931 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 C11orf16Q9NQ32 467 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 A1CFQ9NQ94 594 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 SIP14410 1827 aa13.29□□□□□ -0.28
CHRNA3-205ENST00000559080 PRDM1O75626 825 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 CA3P07451 260 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 ATP2A2P16615 1042 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 PSMC6P62333 389 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 PPARAQ07869 468 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 FSCN1Q16658 493 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 TAPT1Q6NXT6 567 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 SEZ6LQ9BYH1 1024 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 PDGFCQ9NRA1 345 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 FEM1BQ9UK73 627 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 ZNF536O15090 1300 aa13.28□□□□□ -0.28
CHRNA3-205ENST00000559080 PIEZO1Q92508 2521 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms