RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 STK10O94804 968 aaKnown RBP5.87□□□□□ -1.47
VPS13C-207ENST00000558919 ATP2B1P20020 1258 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 DDR2Q16832 855 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 DPY19L1Q2PZI1 675 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 SV2CQ496J9 727 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 ZNF648Q5T619 568 aaPredicted RBP5.87□□□□□ -1.47
VPS13C-207ENST00000558919 MRM1Q6IN84 353 aaKnown RBP5.87□□□□□ -1.47
VPS13C-207ENST00000558919 EEPD1Q7L9B9 569 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 JAMLQ86YT9 394 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 KSR1Q8IVT5 923 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 SIRT2Q8IXJ6 389 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 PPP1R14AQ96A00 147 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 TANGO6Q9C0B7 1094 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
VPS13C-207ENST00000558919 TRBV23OR9-2A0A075B6M9 112 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 OR14I1A6ND48 311 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 KCNH1O95259 989 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 C8AP07357 584 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 PRKCAP17252 672 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 PDE6BP35913 854 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 ARL4AP40617 200 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 SEPHS1P49903 392 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 GALK1P51570 392 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 CORO7P57737 925 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 ERVFRD-1P60508 538 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 CYP4F8P98187 520 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 RAB33AQ14088 237 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 CKAP2LQ8IYA6 745 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 CELF2-AS1Q8N7Q2 184 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 NLGN2Q8NFZ4 835 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 COPS5Q92905 334 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 ARMC5Q96C12 935 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 SLC26A8Q96RN1 970 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 PPP1R16BQ96T49 567 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 IMPACTQ9P2X3 320 aa5.86□□□□□ -1.47
VPS13C-207ENST00000558919 A0A1W2PQ27 194 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 A0A1W2PQ64 194 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 A0A1W2PQC6 194 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 A0A1W2PQD8 194 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 HRKO00198 91 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 PEX10O60683 326 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 PAMP19021 973 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 L1CAMP32004 1257 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 RBM10P98175 930 aaKnown RBP5.85□□□□□ -1.47
VPS13C-207ENST00000558919 KIR3DS1Q14943 382 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 ADGRF1Q5T601 910 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 GTF2IRD2BQ6EKJ0 949 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 SYDE1Q6ZW31 735 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-207ENST00000558919 GTF2IRD2Q86UP8 949 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 NKX2-4Q9H2Z4 354 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 ST7Q9NRC1 585 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 LRP2BPQ9P2M1 347 aa5.85□□□□□ -1.47
VPS13C-207ENST00000558919 ITGAVP06756 1048 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 MVKQ03426 396 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 PKN1Q16512 942 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 NBPF6Q5VWK0 638 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 ZNF227Q86WZ6 799 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 NBPF4Q96M43 638 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 TRIM55Q9BYV6 548 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 TNFRSF12AQ9NP84 129 aa5.84□□□□□ -1.47
VPS13C-207ENST00000558919 AGRPO00253 132 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 ABLIM1O14639 778 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 MPOP05164 745 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 HOXC12P31275 282 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 SCRN1Q12765 414 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 SLC10A6Q3KNW5 377 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 ZNF605Q86T29 641 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 CCDC140Q96MF4 163 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 MMP19Q99542 508 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 PDLIM7Q9NR12 457 aa5.83□□□□□ -1.48
VPS13C-207ENST00000558919 NPHP3-ACAD11A0A0J9YXS1 232 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 TEX51A0A1B0GUA7 166 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 MYOCOSA0A1B0GUC4 107 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 U2SURPO15042 1029 aaKnown RBP5.82□□□□□ -1.48
VPS13C-207ENST00000558919 SEMA7AO75326 666 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 TSPAN15O95858 294 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 CAPNS1P04632 268 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 SCG5P05408 212 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 MSL3P1P0C860 447 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 GLDCP23378 1020 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
VPS13C-207ENST00000558919 TMEM62Q0P6H9 643 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 OLFML2BQ68BL8 750 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 ST13P5Q8NFI4 369 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-207ENST00000558919 BTN2A2Q8WVV5 523 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 SGSM3Q96HU1 749 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 HIRIP3Q9BW71 556 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-207ENST00000558919 LGR4Q9BXB1 951 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 MCOLN1Q9GZU1 580 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 KCNK12Q9HB15 430 aa5.82□□□□□ -1.48
VPS13C-207ENST00000558919 A0A1W2PQJ5 194 aa5.81□□□□□ -1.48
VPS13C-207ENST00000558919 NFIBO00712 420 aa5.81□□□□□ -1.48
VPS13C-207ENST00000558919 SRGAP3O43295 1099 aa5.81□□□□□ -1.48
VPS13C-207ENST00000558919 TBX1O43435 398 aa5.81□□□□□ -1.48
VPS13C-207ENST00000558919 CPP00450 1065 aa5.81□□□□□ -1.48
VPS13C-207ENST00000558919 KRT1P04264 644 aa5.81□□□□□ -1.48
VPS13C-207ENST00000558919 THBDP07204 575 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms