RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 CCDC144BQ3MJ40 725 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 AKNAD1Q5T1N1 836 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 TAPT1Q6NXT6 567 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 ARMCX2Q7L311 632 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 ANKRD33Q7Z3H0 272 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 FAM160B2Q86V87 743 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 ANKRD35Q8N283 1001 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 CHURC1Q8WUH1 139 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 DCAF4Q8WV16 495 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 CLEC4DQ8WXI8 215 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 BADQ92934 168 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 DDX11Q96FC9 970 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 TRERF1Q96PN7 1200 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 ABHD16BQ9H3Z7 469 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 RWDD1Q9H446 243 aaPredicted RBP6.56□□□□□ -1.36
SMAD3-209ENST00000558894 ACAD9Q9H845 621 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 HOMER2Q9NSB8 354 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 RNF146Q9NTX7 359 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 MTMR10Q9NXD2 777 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 CYP39A1Q9NYL5 469 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 FAM184BQ9ULE4 1060 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 GNEQ9Y223 722 aaKnown RBP6.56□□□□□ -1.36
SMAD3-209ENST00000558894 CNPY2Q9Y2B0 182 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 SCN10AQ9Y5Y9 1956 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 REV3LO60673 3130 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 TANC1Q9C0D5 1861 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 GRIN2DO15399 1336 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 MOXD2PA6NHM9 499 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 ASGR1P07306 291 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 ALAS1P13196 640 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 GSPT1P15170 499 aaKnown RBP6.55□□□□□ -1.36
SMAD3-209ENST00000558894 SMPD1P17405 629 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 SLC16A2P36021 539 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 ZNF543Q08ER8 600 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 TKFCQ3LXA3 575 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 CCDC174Q6PII3 467 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 C16orf59Q7L2K0 433 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 RNF180Q86T96 592 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 SLC43A3Q8NBI5 491 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 ANKS1AQ92625 1134 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 RILPL2Q969X0 211 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 VWCEQ96DN2 955 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 TTC14Q96N46 770 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 GUCD1Q96NT3 240 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 PDGFCQ9NRA1 345 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 ZHX1Q9UKY1 873 aaPredicted RBP6.55□□□□□ -1.36
SMAD3-209ENST00000558894 TBX21Q9UL17 535 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 DOCK5Q9H7D0 1870 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 PRUNE2Q8WUY3 3088 aa6.55□□□□□ -1.36
SMAD3-209ENST00000558894 ELP1O95163 1332 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 FRMPD2Q68DX3 1309 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 RBM47A0AV96 593 aaKnown RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 TRIM6-TRIM34B2RNG4 842 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 NFIBO00712 420 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 CD4P01730 458 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 CLTBP09497 229 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 PCP11498 1178 aaKnown RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 BAATQ14032 418 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 RRP12Q5JTH9 1297 aaKnown RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 PPP4R3BQ5MIZ7 849 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 SYDE2Q5VT97 1194 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 FAM109BQ6ICB4 259 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 CWC27Q6UX04 472 aaKnown RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 MFSD6Q6ZSS7 791 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 DGKHQ86XP1 1220 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 FAM126BQ8IXS8 530 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 DEFB123Q8N688 67 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 ZKSCAN3Q9BRR0 538 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 TTYH1Q9H313 450 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 CPVLQ9H3G5 476 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 GPCPD1Q9NPB8 672 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 PRDM5Q9NQX1 630 aaPredicted RBP6.54□□□□□ -1.36
SMAD3-209ENST00000558894 ZSWIM5Q9P217 1185 aa6.54□□□□□ -1.36
SMAD3-209ENST00000558894 TRIP12Q14669 1992 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 ZNF213O14771 459 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 PQBP1O60828 265 aaKnown RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 KDM4AO75164 1064 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 GOLGA8HP0CJ92 632 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 EDNRBP24530 442 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 ALDH5A1P51649 535 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 BEX3Q00994 111 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 SEC23AQ15436 765 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 SLC35G1Q2M3R5 365 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 RASIP1Q5U651 963 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 SLC30A10Q6XR72 485 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 FBXO16Q8IX29 292 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 ENAHQ8N8S7 591 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 TBC1D5Q92609 795 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 SNX27Q96L92 541 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 LBHD1Q9BQE6 289 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-209ENST00000558894 DSCC1Q9BVC3 393 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 PRDM6Q9NQX0 595 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 STARD7Q9NQZ5 370 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 CCPG1Q9ULG6 757 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 STXBP5LQ9Y2K9 1186 aa6.53□□□□□ -1.36
SMAD3-209ENST00000558894 SUPT16HQ9Y5B9 1047 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms