RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
VPS18-203ENST00000558855 PDHBP11177 359 aa16■□□□□ 0.15
VPS18-203ENST00000558855 CST5P28325 142 aaPredicted RBP16■□□□□ 0.15
VPS18-203ENST00000558855 GJA9P57773 515 aa16■□□□□ 0.15
VPS18-203ENST00000558855 AKNAD1Q5T1N1 836 aa16■□□□□ 0.15
VPS18-203ENST00000558855 BTNL9Q6UXG8 535 aa16■□□□□ 0.15
VPS18-203ENST00000558855 SLC30A10Q6XR72 485 aa16■□□□□ 0.15
VPS18-203ENST00000558855 FBXO16Q8IX29 292 aaPredicted RBP16■□□□□ 0.15
VPS18-203ENST00000558855 GUCD1Q96NT3 240 aa16■□□□□ 0.15
VPS18-203ENST00000558855 ABHD16BQ9H3Z7 469 aa16■□□□□ 0.15
VPS18-203ENST00000558855 RWDD1Q9H446 243 aaPredicted RBP16■□□□□ 0.15
VPS18-203ENST00000558855 TCP11L1Q9NUJ3 509 aa16■□□□□ 0.15
VPS18-203ENST00000558855 CCPG1Q9ULG6 757 aa16■□□□□ 0.15
VPS18-203ENST00000558855 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 ASGR1P07306 291 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 SNHG28P0DPA3 235 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 FDX1P10109 184 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
VPS18-203ENST00000558855 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
VPS18-203ENST00000558855 IRX6P78412 446 aaPredicted RBP15.99■□□□□ 0.15
VPS18-203ENST00000558855 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 GPR153Q6NV75 609 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 CWC27Q6UX04 472 aaKnown RBP15.99■□□□□ 0.15
VPS18-203ENST00000558855 NSMFQ6X4W1 530 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 CLEC4DQ8WXI8 215 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 FAM161BQ96MY7 647 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 TSEN34Q9BSV6 310 aaKnown RBP15.99■□□□□ 0.15
VPS18-203ENST00000558855 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 PRKAG2Q9UGJ0 569 aa15.99■□□□□ 0.15
VPS18-203ENST00000558855 GNEQ9Y223 722 aaKnown RBP15.99■□□□□ 0.15
VPS18-203ENST00000558855 KIAA1217Q5T5P2 1943 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 UNC80Q8N2C7 3258 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 RBAK-RBAKDNI3L0D1 243 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 ICAM1P05362 532 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 GOLGA8HP0CJ92 632 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 SMPD1P17405 629 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 CDK7P50613 346 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 TKFCQ3LXA3 575 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 TBX21Q9UL17 535 aa15.98■□□□□ 0.15
VPS18-203ENST00000558855 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
VPS18-203ENST00000558855 SCN5AQ14524 2016 aa15.97■□□□□ 0.15
VPS18-203ENST00000558855 GRIN2DO15399 1336 aa15.97■□□□□ 0.15
VPS18-203ENST00000558855 NKX3-2P78367 333 aa15.97■□□□□ 0.15
VPS18-203ENST00000558855 ZNF543Q08ER8 600 aa15.97■□□□□ 0.15
VPS18-203ENST00000558855 BAATQ14032 418 aaPredicted RBP15.97■□□□□ 0.15
VPS18-203ENST00000558855 MOXD2PA6NHM9 499 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 B4E1Z4 1266 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 TNFAIP2Q03169 654 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 AAMPQ13685 434 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 GNASQ5JWF2 1037 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 MFSD6Q6ZSS7 791 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 MORC4Q8TE76 937 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 UBA5Q9GZZ9 404 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 TAF6LQ9Y6J9 622 aa15.96■□□□□ 0.15
VPS18-203ENST00000558855 UMODL1Q5DID0 1318 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 KDM4AO75164 1064 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
VPS18-203ENST00000558855 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
VPS18-203ENST00000558855 CXCL17Q6UXB2 119 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 TLK2Q86UE8 772 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 TICAM2Q86XR7 235 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 FAM126BQ8IXS8 530 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 PPP1R13LQ8WUF5 828 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 TBC1D5Q92609 795 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 TTYH1Q9H313 450 aaPredicted RBP15.95■□□□□ 0.14
VPS18-203ENST00000558855 DIAPH3Q9NSV4 1193 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 TMEM39AQ9NV64 488 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 SCN10AQ9Y5Y9 1956 aa15.95■□□□□ 0.14
VPS18-203ENST00000558855 RAG1P15918 1043 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 PSMC6P62333 389 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 C16orf59Q7L2K0 433 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 NUP133Q8WUM0 1156 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 STXBP5LQ9Y2K9 1186 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 CHD9Q3L8U1 2897 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 PRUNE2Q8WUY3 3088 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 ELP1O95163 1332 aa15.94■□□□□ 0.14
VPS18-203ENST00000558855 TANC1Q9C0D5 1861 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 ASB14A6NK59 587 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 ARVCFO00192 962 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 ZNF213O14771 459 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 CD4P01730 458 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 ENAHQ8N8S7 591 aaPredicted RBP15.93■□□□□ 0.14
VPS18-203ENST00000558855 SLC43A3Q8NBI5 491 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 GLT1D1Q96MS3 346 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 TOX2Q96NM4 488 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 DSCC1Q9BVC3 393 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 PPP1R12CQ9BZL4 782 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 ZSWIM5Q9P217 1185 aa15.93■□□□□ 0.14
VPS18-203ENST00000558855 MYH7BA7E2Y1 1941 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 PTPRSQ13332 1948 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
VPS18-203ENST00000558855 PTPDC1A2A3K4 754 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 DYNC1LI2O43237 492 aaPredicted RBP15.92■□□□□ 0.14
VPS18-203ENST00000558855 CALML3P27482 149 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 RPS6P62753 249 aaKnown RBP15.92■□□□□ 0.14
VPS18-203ENST00000558855 FPGSQ05932 587 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms