RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 TAPT1Q6NXT6 567 aa13.96□□□□□ -0.17
SEMA4B-205ENST00000558848 SMC5Q8IY18 1101 aa13.96□□□□□ -0.17
SEMA4B-205ENST00000558848 DCAF4Q8WV16 495 aa13.96□□□□□ -0.17
SEMA4B-205ENST00000558848 A0A0U1RQG5 324 aaPredicted RBP13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 RANBP6O60518 1105 aaKnown RBP13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 CD4P01730 458 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 SNHG28P0DPA3 235 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 TNFAIP2Q03169 654 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 GNASQ5JWF2 1037 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 MFSD5Q6N075 450 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 ZNF589Q86UQ0 364 aaPredicted RBP13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 FAM126BQ8IXS8 530 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 SPC25Q9HBM1 224 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 Q9Y3F1 56 aa13.95□□□□□ -0.18
SEMA4B-205ENST00000558848 LOC102724159A0A0B4J2E5 919 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 TOP1P11387 765 aaKnown RBP13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 ALAS1P13196 640 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 SNAP25P60880 206 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 PWP2Q15269 919 aaKnown RBP13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 TTBK2Q6IQ55 1244 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 TTC14Q96N46 770 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 OSBPL3Q9H4L5 887 aa13.94□□□□□ -0.18
SEMA4B-205ENST00000558848 GRIN2DO15399 1336 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 LRRC37A2A6NM11 1700 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 PRUNE2Q8WUY3 3088 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 MCM3APO60318 1980 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 CABYRO75952 493 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 PDHBP11177 359 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 SMPD1P17405 629 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 NMIQ13287 307 aaPredicted RBP13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 IQSEC1Q6DN90 963 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 RNPC3Q96LT9 517 aaKnown RBP13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 CCPG1Q9ULG6 757 aa13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 DDX49Q9Y6V7 483 aaKnown RBP13.93□□□□□ -0.18
SEMA4B-205ENST00000558848 CCDC171Q6TFL3 1326 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 RBM47A0AV96 593 aaKnown RBP13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 SLC16A2P36021 539 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 BEX3Q00994 111 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 TMEM240Q5SV17 173 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 SYDE2Q5VT97 1194 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 TLK2Q86UE8 772 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 CLEC4DQ8WXI8 215 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 CHMP4CQ96CF2 233 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 PURBQ96QR8 312 aaKnown RBP13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.92□□□□□ -0.181e-11■■□□□ 12.3
SEMA4B-205ENST00000558848 SEZ6LQ9BYH1 1024 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 LCTP09848 1927 aa13.92□□□□□ -0.18
SEMA4B-205ENST00000558848 NFIBO00712 420 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 PTGS1P23219 599 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 NT5C2P49902 561 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 AKNAD1Q5T1N1 836 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 TBC1D10CQ8IV04 446 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 LNPKQ9C0E8 428 aa13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 ISY1Q9ULR0 285 aaKnown RBP13.91□□□□□ -0.18
SEMA4B-205ENST00000558848 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 CSF2RAP15509 400 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 SDSP20132 328 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 EDNRBP24530 442 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 NUCB1Q02818 461 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 BAATQ14032 418 aaPredicted RBP13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 DUSP28Q4G0W2 176 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 NSMFQ6X4W1 530 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 ANKS1AQ92625 1134 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
SEMA4B-205ENST00000558848 CHD9Q3L8U1 2897 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 TLR3O15455 904 aaKnown RBP13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 IGHDP01880 384 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 DNAJB2P25686 324 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 ALDH5A1P51649 535 aaPredicted RBP13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 HAND2P61296 217 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 DGKHQ86XP1 1220 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 TMEM199Q8N511 208 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
SEMA4B-205ENST00000558848 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms