RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 MAPK13O15264 365 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 RANBP6O60518 1105 aaKnown RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 HDAC4P56524 1084 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 EMBQ6PCB8 327 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 ANO5Q75V66 913 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 LCMT1Q9UIC8 334 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 MAP3K2Q9Y2U5 619 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 ECE1P42892 770 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 DHX9Q08211 1270 aaKnown RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 FLOT2Q14254 428 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 HOOK2Q96ED9 719 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 ZNF229Q9UJW7 825 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 SYNRGQ9UMZ2 1314 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 PLEKHG2Q9H7P9 1386 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 KRIT1O00522 736 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 DCTN3O75935 186 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 EIF3BP55884 814 aaKnown RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 SNX29Q8TEQ0 813 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 ZNF483Q8TF39 744 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-208ENST00000558768 COQ7Q99807 217 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 IMPG2Q9BZV3 1241 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 MKNK2Q9HBH9 465 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 RHBDL2Q9NX52 303 aa10.55□□□□□ -0.72
TRPM1-208ENST00000558768 H0Y3Z8 333 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 MEFVO15553 781 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 ATP1A3P13637 1013 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 SLC35F6Q8N357 371 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 ZCRB1Q8TBF4 217 aaKnown RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 MAML3Q96JK9 1138 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 SERPINI1Q99574 410 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 SH3GL1Q99961 368 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 POLR3EQ9NVU0 708 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 FAM53CQ9NYF3 392 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 RNF14Q9UBS8 474 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 WARS2Q9UGM6 360 aaKnown RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 CEP152O94986 1710 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 ADGRB2O60241 1585 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 EDC4Q6P2E9 1401 aaKnown RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 A0A0D9SFI3 127 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 SCRN1Q12765 414 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 NSUN7Q8NE18 718 aaKnown RBP10.54□□□□□ -0.72
TRPM1-208ENST00000558768 TTC1Q99614 292 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 PREX2Q70Z35 1606 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 RCN2Q14257 317 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 ASIC2Q16515 512 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 NDEL1Q9GZM8 345 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 GOLPH3LQ9H4A5 285 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 ORC6Q9Y5N6 252 aa10.54□□□□□ -0.72
TRPM1-208ENST00000558768 LRRIQ3A6PVS8 624 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-208ENST00000558768 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-208ENST00000558768 SERPINB3P29508 390 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 GOLGA8FQ08AF8 430 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 GOLGA8DPQ0D2H9 430 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 LONRF3Q496Y0 759 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 KIF6Q6ZMV9 814 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 WDR24Q96S15 920 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 C19orf44Q9H6X5 657 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 GRM8O00222 908 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 FOXO3O43524 673 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 PDE5AO76074 875 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 RAD23BP54727 409 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 STRN3Q13033 797 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 PDCLQ13371 301 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 POLA2Q14181 598 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 PACS2Q86VP3 889 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 BBOF1Q8ND07 529 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 VIPAS39Q9H9C1 493 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 RIC8AQ9NPQ8 531 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 AMFRQ9UKV5 643 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 THAP12O43422 761 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 CSGALNACT2Q8N6G5 542 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 MAK16Q9BXY0 300 aaKnown RBP10.53□□□□□ -0.72
TRPM1-208ENST00000558768 ANKRD2Q9GZV1 360 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 TUBA8Q9NY65 449 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-208ENST00000558768 ETAA1Q9NY74 926 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 CLTCL1P53675 1640 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 AATKQ6ZMQ8 1374 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 CALML3P27482 149 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 PAK1Q13153 545 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 PNOCQ13519 176 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 TOB2Q14106 344 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-208ENST00000558768 B4GALNT2Q8NHY0 566 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 CUL5Q93034 780 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 PANX2Q96RD6 677 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 IFT122Q9HBG6 1241 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 CDC42BPBQ9Y5S2 1711 aa10.53□□□□□ -0.72
TRPM1-208ENST00000558768 GNAT2P19087 354 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms