RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 RANBP6O60518 1105 aaKnown RBP21.95■■□□□ 1.1
RMDN3-206ENST00000558560 ICAM1P05362 532 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 ALAS1P13196 640 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 CTDSPL2Q05D32 466 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 MCMDC2Q4G0Z9 681 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 KCTD1Q719H9 257 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 MORC4Q8TE76 937 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 FAM161BQ96MY7 647 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 CYP39A1Q9NYL5 469 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 GNEQ9Y223 722 aaKnown RBP21.95■■□□□ 1.1
RMDN3-206ENST00000558560 UNC80Q8N2C7 3258 aa21.95■■□□□ 1.1
RMDN3-206ENST00000558560 LRRC37A2A6NM11 1700 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 ZEB2O60315 1214 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 TOP1P11387 765 aaKnown RBP21.94■■□□□ 1.1
RMDN3-206ENST00000558560 FAM126BQ8IXS8 530 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 TMEM199Q8N511 208 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 SLC43A3Q8NBI5 491 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 VTI1AQ96AJ9 217 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 TTC14Q96N46 770 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 RANBP17Q9H2T7 1088 aaKnown RBP21.94■■□□□ 1.1
RMDN3-206ENST00000558560 TTYH1Q9H313 450 aaPredicted RBP21.94■■□□□ 1.1
RMDN3-206ENST00000558560 LCTP09848 1927 aa21.94■■□□□ 1.1
RMDN3-206ENST00000558560 FGAP02671 866 aa21.93■■□□□ 1.1
RMDN3-206ENST00000558560 VPS53Q5VIR6 699 aa21.93■■□□□ 1.1
RMDN3-206ENST00000558560 AP5M1Q9H0R1 490 aa21.93■■□□□ 1.1
RMDN3-206ENST00000558560 VTA1Q9NP79 307 aa21.93■■□□□ 1.1
RMDN3-206ENST00000558560 ADD3Q9UEY8 706 aaKnown RBP21.93■■□□□ 1.1
RMDN3-206ENST00000558560 CCPG1Q9ULG6 757 aa21.93■■□□□ 1.1
RMDN3-206ENST00000558560 NMT2O60551 498 aa21.92■■□□□ 1.1
RMDN3-206ENST00000558560 CD4P01730 458 aa21.92■■□□□ 1.1
RMDN3-206ENST00000558560 RASIP1Q5U651 963 aa21.91■■□□□ 1.1
RMDN3-206ENST00000558560 NOL8Q76FK4 1167 aaKnown RBP21.91■■□□□ 1.1
RMDN3-206ENST00000558560 TLK2Q86UE8 772 aa21.91■■□□□ 1.1
RMDN3-206ENST00000558560 MAFAQ8NHW3 353 aaPredicted RBP21.91■■□□□ 1.1
RMDN3-206ENST00000558560 MAF1Q9H063 256 aa21.91■■□□□ 1.1
RMDN3-206ENST00000558560 INCENPQ9NQS7 918 aa21.91■■□□□ 1.1
RMDN3-206ENST00000558560 ASTN1O14525 1302 aa21.9■■□□□ 1.1
RMDN3-206ENST00000558560 HSPD1P10809 573 aaKnown RBP21.9■■□□□ 1.1
RMDN3-206ENST00000558560 MFAP1P55081 439 aaKnown RBP21.9■■□□□ 1.1
RMDN3-206ENST00000558560 IRX5P78411 483 aaPredicted RBP21.9■■□□□ 1.1
RMDN3-206ENST00000558560 FSCN1Q16658 493 aaKnown RBP21.9■■□□□ 1.1
RMDN3-206ENST00000558560 CCDC96Q2M329 555 aa21.9■■□□□ 1.1
RMDN3-206ENST00000558560 MUM1L1Q5H9M0 696 aa21.9■■□□□ 1.1
RMDN3-206ENST00000558560 TAPT1Q6NXT6 567 aa21.9■■□□□ 1.1
RMDN3-206ENST00000558560 PSRC1Q6PGN9 363 aaPredicted RBP21.9■■□□□ 1.1
RMDN3-206ENST00000558560 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.9■■□□□ 1.14e-6■■■□□ 15.3
RMDN3-206ENST00000558560 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.89■■□□□ 1.09
RMDN3-206ENST00000558560 SMPD1P17405 629 aa21.89■■□□□ 1.09
RMDN3-206ENST00000558560 DNAJB2P25686 324 aa21.89■■□□□ 1.09
RMDN3-206ENST00000558560 TMEM240Q5SV17 173 aa21.89■■□□□ 1.09
RMDN3-206ENST00000558560 SYDE2Q5VT97 1194 aa21.89■■□□□ 1.09
RMDN3-206ENST00000558560 TMEM47Q9BQJ4 181 aa21.89■■□□□ 1.09
RMDN3-206ENST00000558560 BEX3Q00994 111 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 ITGA7Q13683 1181 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 CXCL17Q6UXB2 119 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 NSMFQ6X4W1 530 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 MYLIPQ8WY64 445 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 FAM227BQ96M60 508 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 CRBNQ96SW2 442 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 RNF41Q9H4P4 317 aaPredicted RBP21.88■■□□□ 1.09
RMDN3-206ENST00000558560 TOMM22Q9NS69 142 aa21.88■■□□□ 1.09
RMDN3-206ENST00000558560 CCDC171Q6TFL3 1326 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 WDR19Q8NEZ3 1342 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 A0A0D9SFI3 127 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 RBM47A0AV96 593 aaKnown RBP21.87■■□□□ 1.09
RMDN3-206ENST00000558560 DYNC1LI2O43237 492 aaPredicted RBP21.87■■□□□ 1.09
RMDN3-206ENST00000558560 SNHG28P0DPA3 235 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 FOSL2P15408 326 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 DUSP28Q4G0W2 176 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 AKNAD1Q5T1N1 836 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 C16orf59Q7L2K0 433 aa21.87■■□□□ 1.09
RMDN3-206ENST00000558560 MPHOSPH6Q99547 160 aaKnown RBP21.87■■□□□ 1.09
RMDN3-206ENST00000558560 COL25A1Q9BXS0 654 aaPredicted RBP21.87■■□□□ 1.09
RMDN3-206ENST00000558560 MTIF3Q9H2K0 278 aaKnown RBP21.87■■□□□ 1.09
RMDN3-206ENST00000558560 PDHBP11177 359 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 CSF2RAP15509 400 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 CCDC178Q5BJE1 867 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 TTBK2Q6IQ55 1244 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 MFSD6Q6ZSS7 791 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 IL23AQ9NPF7 189 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 CDH23Q9H251 3354 aa21.86■■□□□ 1.09
RMDN3-206ENST00000558560 B4DLN1 442 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 ALDH5A1P51649 535 aaPredicted RBP21.85■■□□□ 1.09
RMDN3-206ENST00000558560 MRPL12P52815 198 aaKnown RBP21.85■■□□□ 1.09
RMDN3-206ENST00000558560 SNAP25P60880 206 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 ZNF543Q08ER8 600 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 BAATQ14032 418 aaPredicted RBP21.85■■□□□ 1.09
RMDN3-206ENST00000558560 RRP12Q5JTH9 1297 aaKnown RBP21.85■■□□□ 1.09
RMDN3-206ENST00000558560 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
RMDN3-206ENST00000558560 KIAA1211Q6ZU35 1233 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 FBXO16Q8IX29 292 aaPredicted RBP21.85■■□□□ 1.09
RMDN3-206ENST00000558560 SMC5Q8IY18 1101 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 RGS22Q8NE09 1264 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 DNERQ8NFT8 737 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 HERVK_113Q902F9 699 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 TIFAQ96CG3 184 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 HIPK3Q9H422 1215 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 OSBPL3Q9H4L5 887 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 ZNF576Q9H609 170 aa21.85■■□□□ 1.09
RMDN3-206ENST00000558560 PDGFCQ9NRA1 345 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms