RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 IKQ13123 557 aaPredicted RBP19.33■□□□□ 0.68
RPL28-205ENST00000558131 MCMDC2Q4G0Z9 681 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 TMEM63BQ5T3F8 832 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 TICAM2Q86XR7 235 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 DCAF4Q8WV16 495 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 PURBQ96QR8 312 aaKnown RBP19.33■□□□□ 0.68
RPL28-205ENST00000558131 TMEM47Q9BQJ4 181 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 LNPKQ9C0E8 428 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 TMEM39AQ9NV64 488 aa19.33■□□□□ 0.68
RPL28-205ENST00000558131 ISY1Q9ULR0 285 aaKnown RBP19.33■□□□□ 0.68
RPL28-205ENST00000558131 CCDC171Q6TFL3 1326 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 ICAM1P05362 532 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 RAG1P15918 1043 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 ZNF697Q5TEC3 545 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 TBC1D10CQ8IV04 446 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 FAM126BQ8IXS8 530 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 MORC4Q8TE76 937 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 TCP11L1Q9NUJ3 509 aa19.32■□□□□ 0.68
RPL28-205ENST00000558131 DLL1O00548 723 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 SLC16A2P36021 539 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 BEX3Q00994 111 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 FPGSQ05932 587 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 TAPT1Q6NXT6 567 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 PCSK9Q8NBP7 692 aaKnown RBP19.31■□□□□ 0.68
RPL28-205ENST00000558131 GLT1D1Q96MS3 346 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 PDGFCQ9NRA1 345 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 MTMR7Q9Y216 660 aa19.31■□□□□ 0.68
RPL28-205ENST00000558131 NEDD4P46934 1319 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 ASB14A6NK59 587 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 DCDC2CA8MYV0 355 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 ARVCFO00192 962 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 NFIBO00712 420 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 TIMP1P01033 207 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 SNHG28P0DPA3 235 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 PDHBP11177 359 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 SMPD1P17405 629 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 HAND2P61296 217 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 TNFAIP2Q03169 654 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 CCDC96Q2M329 555 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 TLK2Q86UE8 772 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 FBXO16Q8IX29 292 aaPredicted RBP19.3■□□□□ 0.68
RPL28-205ENST00000558131 SLC43A3Q8NBI5 491 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 SEMA6BQ9H3T3 888 aa19.3■□□□□ 0.68
RPL28-205ENST00000558131 MYH6P13533 1939 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 GRIN2DO15399 1336 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 MROH7Q68CQ1 1323 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
RPL28-205ENST00000558131 TANC1Q9C0D5 1861 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 A0A0U1RQG5 324 aaPredicted RBP19.29■□□□□ 0.68
RPL28-205ENST00000558131 CD4P01730 458 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 IGHDP01880 384 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 TOP1P11387 765 aaKnown RBP19.29■□□□□ 0.68
RPL28-205ENST00000558131 RRP12Q5JTH9 1297 aaKnown RBP19.29■□□□□ 0.68
RPL28-205ENST00000558131 GNASQ5JWF2 1037 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 SYDE2Q5VT97 1194 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 C16orf59Q7L2K0 433 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 RNPC3Q96LT9 517 aaKnown RBP19.29■□□□□ 0.68
RPL28-205ENST00000558131 CDX2Q99626 313 aaPredicted RBP19.29■□□□□ 0.68
RPL28-205ENST00000558131 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
RPL28-205ENST00000558131 RASIP1Q5U651 963 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 MFSD5Q6N075 450 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 PLEKHM2Q8IWE5 1019 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 CLEC4DQ8WXI8 215 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.28■□□□□ 0.682e-8■■■□□ 17.5
RPL28-205ENST00000558131 SPC25Q9HBM1 224 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 ZBTB47Q9UFB7 747 aaPredicted RBP19.28■□□□□ 0.68
RPL28-205ENST00000558131 XIRP2A4UGR9 3374 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 SCN10AQ9Y5Y9 1956 aa19.28■□□□□ 0.68
RPL28-205ENST00000558131 SDSP20132 328 aa19.27■□□□□ 0.68
RPL28-205ENST00000558131 AKNAD1Q5T1N1 836 aa19.27■□□□□ 0.68
RPL28-205ENST00000558131 CXCL17Q6UXB2 119 aa19.27■□□□□ 0.68
RPL28-205ENST00000558131 NSMFQ6X4W1 530 aa19.27■□□□□ 0.68
RPL28-205ENST00000558131 SLC30A10Q6XR72 485 aa19.27■□□□□ 0.68
RPL28-205ENST00000558131 TOMM22Q9NS69 142 aa19.27■□□□□ 0.68
RPL28-205ENST00000558131 KIAA1217Q5T5P2 1943 aa19.27■□□□□ 0.67
RPL28-205ENST00000558131 CUL9Q8IWT3 2517 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 TRIM6-TRIM34B2RNG4 842 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 ALDH5A1P51649 535 aaPredicted RBP19.26■□□□□ 0.67
RPL28-205ENST00000558131 NUCB1Q02818 461 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 ZNF543Q08ER8 600 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 AAMPQ13685 434 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 BAATQ14032 418 aaPredicted RBP19.26■□□□□ 0.67
RPL28-205ENST00000558131 FSCN1Q16658 493 aaKnown RBP19.26■□□□□ 0.67
RPL28-205ENST00000558131 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 EEPD1Q7L9B9 569 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 CHD1LQ86WJ1 897 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 VTA1Q9NP79 307 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 GPCPD1Q9NPB8 672 aa19.26■□□□□ 0.67
RPL28-205ENST00000558131 UMODL1Q5DID0 1318 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 TMEM265A0A087WTH1 108 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 CSF2RAP15509 400 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 TMEM240Q5SV17 173 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 MYLIPQ8WY64 445 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 RILPL2Q969X0 211 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 Q9Y3F1 56 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 SCN5AQ14524 2016 aa19.25■□□□□ 0.67
RPL28-205ENST00000558131 TRANK1O15050 2925 aa19.24■□□□□ 0.67
RPL28-205ENST00000558131 PCP11498 1178 aaKnown RBP19.24■□□□□ 0.67
RPL28-205ENST00000558131 IQSEC1Q6DN90 963 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms