RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 RFC2P35250 354 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TNFAIP2Q03169 654 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TLK2Q86UE8 772 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 NKD2Q969F2 451 aaPredicted RBP11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 ASIC4Q96FT7 647 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 KATNBL1Q9H079 304 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 ZNF214Q9UL59 606 aaPredicted RBP11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 SPTBN2O15020 2390 aa11.81□□□□□ -0.52
IGKV2D-28-202ENST00000558026 MPHOSPH10O00566 681 aaKnown RBP11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 BAIAP3O94812 1187 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 GJB5O95377 273 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 EVX2Q03828 476 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TIGD5Q53EQ6 642 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 ARMCX2Q7L311 632 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 CRBNQ96SW2 442 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 RAD9AQ99638 391 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 ADAMTS5Q9UNA0 930 aa11.8□□□□□ -0.52
IGKV2D-28-202ENST00000558026 VWA5AO00534 786 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 DYNC1LI2O43237 492 aaPredicted RBP11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 MCAMP43121 646 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 PLCD1P51178 756 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 SIGLEC14Q08ET2 396 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 REPS2Q8NFH8 660 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 EHD4Q9H223 541 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 RIPK3Q9Y572 518 aa11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
IGKV2D-28-202ENST00000558026 CEP250Q9BV73 2442 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 GPNMBQ14956 572 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 PTPROQ16827 1216 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 ST3GAL2Q16842 350 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 NSUN3Q9H649 340 aaKnown RBP11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
IGKV2D-28-202ENST00000558026 TBX10O75333 385 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 SMPD1P17405 629 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 GTF2F1P35269 517 aaKnown RBP eCLIP11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 TFCP2Q12800 502 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 SMAD4Q13485 552 aaKnown RBP11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 CTC1Q2NKJ3 1217 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 EPC2Q52LR7 807 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 FAM47CQ5HY64 1035 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 SEZ6LQ9BYH1 1024 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 USP24Q9UPU5 2620 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 IL16Q14005 1332 aa11.77□□□□□ -0.53
IGKV2D-28-202ENST00000558026 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 ZEB2O60315 1214 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 USP5P45974 858 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 GPM6BQ13491 265 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
IGKV2D-28-202ENST00000558026 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 LOC730098B7Z3J9 87 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 LINC01565O15544 149 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 COPB2P35606 906 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 CNTN2Q02246 1040 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 HYAL1Q12794 435 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 KIAA2013Q8IYS2 634 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 TMEM105Q8N8V8 129 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 TMX2Q9Y320 296 aa11.75□□□□□ -0.53
IGKV2D-28-202ENST00000558026 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 H3BNC9 293 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 GABPAQ06546 454 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 PUM1Q14671 1186 aaKnown RBP eCLIP11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 CD207Q9UJ71 328 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 SCN10AQ9Y5Y9 1956 aa11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 FASNP49327 2511 aaKnown RBP11.74□□□□□ -0.53
IGKV2D-28-202ENST00000558026 CSPG5O95196 566 aa11.73□□□□□ -0.53
IGKV2D-28-202ENST00000558026 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
IGKV2D-28-202ENST00000558026 CYP7A1P22680 504 aa11.73□□□□□ -0.53
IGKV2D-28-202ENST00000558026 NUBP1P53384 320 aa11.73□□□□□ -0.53
IGKV2D-28-202ENST00000558026 PURAQ00577 322 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms