RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HIP1O00291 1037 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 ZNF213O14771 459 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 TLR3O15455 904 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 ZEB2O60315 1214 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 CABYRO75952 493 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 ESR2Q92731 530 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 MPHOSPH6Q99547 160 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
SNRPA1-204ENST00000558020 LOC102724159A0A0B4J2E5 919 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 SOWAHBA6NEL2 793 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 ARVCFO00192 962 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 TIMP1P01033 207 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 SDSP20132 328 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 SNAP25P60880 206 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 HAND2P61296 217 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 NKX3-2P78367 333 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 PWP2Q15269 919 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 CCDC178Q5BJE1 867 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 SYDE2Q5VT97 1194 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 RNPC3Q96LT9 517 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 RANBP17Q9H2T7 1088 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 OSBPL3Q9H4L5 887 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 Q9Y3F1 56 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 LTBP2Q14767 1821 aa16.01■□□□□ 0.15
SNRPA1-204ENST00000558020 A0A0C4DFX4 3053 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 B4DLN1 442 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 SLC16A2P36021 539 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 CDK7P50613 346 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 MRPL12P52815 198 aaKnown RBP16■□□□□ 0.15
SNRPA1-204ENST00000558020 NUCB1Q02818 461 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 MUM1L1Q5H9M0 696 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 KATNBL1Q9H079 304 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 VTA1Q9NP79 307 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
SNRPA1-204ENST00000558020 MYADML2A6NDP7 307 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 DLL1O00548 723 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 DYNC1LI2O43237 492 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 ITGB8P26012 769 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 BAATQ14032 418 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 FSCN1Q16658 493 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 GPATCH4Q5T3I0 446 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 TTBK2Q6IQ55 1244 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 MFSD5Q6N075 450 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 TLK2Q86UE8 772 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 ZNF589Q86UQ0 364 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 DGKHQ86XP1 1220 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 FAM161BQ96MY7 647 aa15.99■□□□□ 0.15
SNRPA1-204ENST00000558020 FRMPD2Q68DX3 1309 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 ADCY6O43306 1168 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 PDHBP11177 359 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 PPIGQ13427 754 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 KIAA1211Q6ZU35 1233 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 SEMA6BQ9H3T3 888 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 CTNNA3Q9UI47 895 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 TBX21Q9UL17 535 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 GNEQ9Y223 722 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 MCM3APO60318 1980 aa15.98■□□□□ 0.15
SNRPA1-204ENST00000558020 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 BEX3Q00994 111 aa15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 ZNF543Q08ER8 600 aa15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 BRDTQ58F21 947 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 EEPD1Q7L9B9 569 aa15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
SNRPA1-204ENST00000558020 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 CTAGE5O15320 804 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 IGHDP01880 384 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 SMPD1P17405 629 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 EPHB4P54760 987 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 IRX5P78411 483 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 ITGA7Q13683 1181 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 IMMTQ16891 758 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 TAPT1Q6NXT6 567 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 RNF207Q6ZRF8 634 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 FBXO16Q8IX29 292 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 FAM126BQ8IXS8 530 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 GUCD1Q96NT3 240 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 MAF1Q9H063 256 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 PDGFCQ9NRA1 345 aa15.96■□□□□ 0.15
SNRPA1-204ENST00000558020 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 NFIBO00712 420 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 SNHG28P0DPA3 235 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 CALML3P27482 149 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms