RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CCDC174Q6PII3 467 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 SLC43A3Q8NBI5 491 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 EVI5LQ96CN4 794 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 HELLSQ9NRZ9 838 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 CYP39A1Q9NYL5 469 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 RANBP6O60518 1105 aaKnown RBP18.87■□□□□ 0.61
SCFD1-224ENST00000557713 PPIGQ13427 754 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCFD1-224ENST00000557713 TMEM240Q5SV17 173 aa18.87■□□□□ 0.61
SCFD1-224ENST00000557713 ANKRD45Q5TZF3 282 aa18.87■□□□□ 0.61
SCFD1-224ENST00000557713 RASIP1Q5U651 963 aa18.87■□□□□ 0.61
SCFD1-224ENST00000557713 TAPT1Q6NXT6 567 aa18.87■□□□□ 0.61
SCFD1-224ENST00000557713 DDX49Q9Y6V7 483 aaKnown RBP18.87■□□□□ 0.61
SCFD1-224ENST00000557713 CDH23Q9H251 3354 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 EYSQ5T1H1 3165 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 TLR3O15455 904 aaKnown RBP18.86■□□□□ 0.61
SCFD1-224ENST00000557713 FOSL2P15408 326 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 CSF2RAP15509 400 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 SMPD1P17405 629 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 DNAJB2P25686 324 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 IQSEC1Q6DN90 963 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 NOL8Q76FK4 1167 aaKnown RBP18.86■□□□□ 0.61
SCFD1-224ENST00000557713 TMEM199Q8N511 208 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 DCAF4Q8WV16 495 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 PDGFCQ9NRA1 345 aa18.86■□□□□ 0.61
SCFD1-224ENST00000557713 GRIN2DO15399 1336 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 CABYRO75952 493 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 FGAP02671 866 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 ICAM1P05362 532 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 PTGS1P23219 599 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 PDE1AP54750 535 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 TMEM63BQ5T3F8 832 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 TTBK2Q6IQ55 1244 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 CXCL17Q6UXB2 119 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 BTNL9Q6UXG8 535 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 TLK2Q86UE8 772 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 PURBQ96QR8 312 aaKnown RBP18.85■□□□□ 0.61
SCFD1-224ENST00000557713 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 AP5M1Q9H0R1 490 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 RANBP17Q9H2T7 1088 aaKnown RBP18.85■□□□□ 0.61
SCFD1-224ENST00000557713 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 Q9Y3F1 56 aa18.85■□□□□ 0.61
SCFD1-224ENST00000557713 DYNC1LI2O43237 492 aaPredicted RBP18.84■□□□□ 0.61
SCFD1-224ENST00000557713 RRP1P56182 461 aaKnown RBP18.84■□□□□ 0.61
SCFD1-224ENST00000557713 FSCN1Q16658 493 aaKnown RBP18.84■□□□□ 0.61
SCFD1-224ENST00000557713 ZNF365Q70YC5 407 aa18.84■□□□□ 0.61
SCFD1-224ENST00000557713 TICAM2Q86XR7 235 aa18.84■□□□□ 0.61
SCFD1-224ENST00000557713 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
SCFD1-224ENST00000557713 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
SCFD1-224ENST00000557713 MTMR7Q9Y216 660 aa18.84■□□□□ 0.61
SCFD1-224ENST00000557713 ACRP10323 421 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 TOP1P11387 765 aaKnown RBP18.83■□□□□ 0.6
SCFD1-224ENST00000557713 CYP2C18P33260 490 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 SLC16A2P36021 539 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 ITGA7Q13683 1181 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 CCDC96Q2M329 555 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 MCMDC2Q4G0Z9 681 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 NSMFQ6X4W1 530 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 EEPD1Q7L9B9 569 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 FBXO16Q8IX29 292 aaPredicted RBP18.83■□□□□ 0.6
SCFD1-224ENST00000557713 FAM227BQ96M60 508 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 TMEM47Q9BQJ4 181 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 SEZ6LQ9BYH1 1024 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 ZNF576Q9H609 170 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 VTA1Q9NP79 307 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
SCFD1-224ENST00000557713 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
SCFD1-224ENST00000557713 GRXCR1A8MXD5 290 aa18.82■□□□□ 0.6
SCFD1-224ENST00000557713 HSPD1P10809 573 aaKnown RBP18.82■□□□□ 0.6
SCFD1-224ENST00000557713 HDAC1Q13547 482 aaPredicted RBP18.82■□□□□ 0.6
SCFD1-224ENST00000557713 BAATQ14032 418 aaPredicted RBP18.82■□□□□ 0.6
SCFD1-224ENST00000557713 SYDE2Q5VT97 1194 aa18.82■□□□□ 0.6
SCFD1-224ENST00000557713 PSRC1Q6PGN9 363 aaPredicted RBP18.82■□□□□ 0.6
SCFD1-224ENST00000557713 TIFAQ96CG3 184 aa18.82■□□□□ 0.6
SCFD1-224ENST00000557713 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
SCFD1-224ENST00000557713 IL23AQ9NPF7 189 aa18.82■□□□□ 0.6
SCFD1-224ENST00000557713 ZEB2O60315 1214 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 PBX2P40425 430 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 TOMM22Q9NS69 142 aa18.81■□□□□ 0.6
SCFD1-224ENST00000557713 ADD3Q9UEY8 706 aaKnown RBP18.81■□□□□ 0.6
SCFD1-224ENST00000557713 LCTP09848 1927 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 ZMYM6O95789 1325 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 UMODL1Q5DID0 1318 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 LOC102724159A0A0B4J2E5 919 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 NFIBO00712 420 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 ALDH5A1P51649 535 aaPredicted RBP18.8■□□□□ 0.6
SCFD1-224ENST00000557713 PWP2Q15269 919 aaKnown RBP18.8■□□□□ 0.6
SCFD1-224ENST00000557713 DUSP28Q4G0W2 176 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 RRP12Q5JTH9 1297 aaKnown RBP18.8■□□□□ 0.6
SCFD1-224ENST00000557713 ZNF589Q86UQ0 364 aaPredicted RBP18.8■□□□□ 0.6
SCFD1-224ENST00000557713 HERVK_113Q902F9 699 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 TRPV6Q9H1D0 765 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 HIPK3Q9H422 1215 aa18.8■□□□□ 0.6
SCFD1-224ENST00000557713 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
SCFD1-224ENST00000557713 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms