RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 N4BP3O15049 544 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 FOXP2O15409 715 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 KRT86O43790 486 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 PRLRP16471 622 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 NR1D1P20393 614 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 KRT83P78385 493 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 SPAG1Q07617 926 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 ANKRD20A8PQ5CZ79 823 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 IQCF2Q8IXL9 164 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 MREGQ8N565 214 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 OR8K1Q8NGG5 319 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 OSBPL7Q9BZF2 842 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 ZNF233A6NK53 670 aa11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 SEC24CP53992 1094 aa11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 RAB11FIP4Q86YS3 637 aa11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 CYFIP2Q96F07 1278 aa11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 SPATS2LQ9NUQ6 558 aaKnown RBP11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 SNX12Q9UMY4 172 aa11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 SRPRBQ9Y5M8 271 aaKnown RBP11.62□□□□□ -0.55
SUPT16H-207ENST00000557394 M0R2C6 588 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 SETSIPP0DME0 302 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 KCNA2P16389 499 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 CCT6AP40227 531 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 RASA3Q14644 834 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 NAA25Q14CX7 972 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 CHRNA2Q15822 529 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 MEA1Q16626 185 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 IMMTQ16891 758 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 GLE1Q53GS7 698 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 KLHL10Q6JEL2 608 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 WDR59Q6PJI9 974 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 NOSTRINQ8IVI9 506 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 SPATA4Q8NEY3 305 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 RASSF8Q8NHQ8 419 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 NCOA7Q8NI08 942 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 P3H4Q92791 437 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 GSDMAQ96QA5 445 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 EBF2Q9HAK2 575 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 HAUS2Q9NVX0 235 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 ETAA1Q9NY74 926 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 STIM2Q9P246 746 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 DNAJC8O75937 253 aaPredicted RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 KRT14P02533 472 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 DPYDQ12882 1025 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 ITGB3BPQ13352 177 aaPredicted RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 SPRED3Q2MJR0 410 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 RABL6Q3YEC7 729 aaPredicted RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 HAUS3Q68CZ6 603 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 KCTD16Q68DU8 428 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 CCDC47Q96A33 483 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 SCLT1Q96NL6 688 aa11.61□□□□□ -0.55
SUPT16H-207ENST00000557394 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 EME2A4GXA9 379 aaPredicted RBP11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 C5orf60A6NFR6 353 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 GBP2P32456 591 aaPredicted RBP11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 GCKRQ14397 625 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 TTF1Q15361 905 aaPredicted RBP11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 NTRK3Q16288 839 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 WASHC4Q2M389 1173 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 AP1ARQ63HQ0 302 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 TRIM74Q86UV6 250 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 TRIM73Q86UV7 250 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 ATP6V1G3Q96LB4 118 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 LACRTQ9GZZ8 138 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 HOMER3Q9NSC5 361 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 SWAP70Q9UH65 585 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 TTC26A0AVF1 554 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 FRMD3A2A2Y4 597 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 GHRP10912 638 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 IDEP14735 1019 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 GCKP35557 465 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 SCTRP47872 440 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 METAP2P50579 478 aaKnown RBP eCLIP11.6□□□□□ -0.555e-7■□□□□ 8.9
SUPT16H-207ENST00000557394 CCDC26Q8TAB7 109 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 DUSP9Q99956 384 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 PARP4Q9UKK3 1724 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 PLCH1Q4KWH8 1693 aa11.6□□□□□ -0.55
SUPT16H-207ENST00000557394 COL5A2P05997 1499 aaPredicted RBP11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 E7EVH7 732 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 ABCB7O75027 752 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 RWDD2BP57060 319 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 TRIM29Q14134 588 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 ZNF394Q53GI3 561 aa11.59□□□□□ -0.55
SUPT16H-207ENST00000557394 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms