RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 TTC14Q96N46 770 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 CYP39A1Q9NYL5 469 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 CCPG1Q9ULG6 757 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 PCP11498 1178 aaKnown RBP18.73■□□□□ 0.59
TUBB3-213ENST00000557262 SDSP20132 328 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 SLC16A2P36021 539 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
TUBB3-213ENST00000557262 AKNAD1Q5T1N1 836 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 NOL8Q76FK4 1167 aaKnown RBP18.73■□□□□ 0.59
TUBB3-213ENST00000557262 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 PLEKHM2Q8IWE5 1019 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
TUBB3-213ENST00000557262 RANBP17Q9H2T7 1088 aaKnown RBP18.73■□□□□ 0.59
TUBB3-213ENST00000557262 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 MROH7Q68CQ1 1323 aa18.73■□□□□ 0.59
TUBB3-213ENST00000557262 CTAGE5O15320 804 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 IGHDP01880 384 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 HAND2P61296 217 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 FPGSQ05932 587 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 ZNF697Q5TEC3 545 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 SYDE2Q5VT97 1194 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 IQSEC1Q6DN90 963 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 NSMFQ6X4W1 530 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
TUBB3-213ENST00000557262 A0A0U1RQG5 324 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-213ENST00000557262 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-213ENST00000557262 ARVCFO00192 962 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 TIMP1P01033 207 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 EPHB4P54760 987 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 SMAD3P84022 425 aaKnown RBP18.71■□□□□ 0.59
TUBB3-213ENST00000557262 NUCB1Q02818 461 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 FAM161BQ96MY7 647 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 GUCD1Q96NT3 240 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 RNF41Q9H4P4 317 aaPredicted RBP18.71■□□□□ 0.59
TUBB3-213ENST00000557262 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
TUBB3-213ENST00000557262 MCM3APO60318 1980 aa18.71■□□□□ 0.59
TUBB3-213ENST00000557262 BEX3Q00994 111 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 TAPT1Q6NXT6 567 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 RNPC3Q96LT9 517 aaKnown RBP18.7■□□□□ 0.58
TUBB3-213ENST00000557262 AP5M1Q9H0R1 490 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 TBX21Q9UL17 535 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 PNMA2Q9UL42 364 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 Q9Y3F1 56 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 ASTN1O14525 1302 aa18.7■□□□□ 0.58
TUBB3-213ENST00000557262 FRMPD2Q68DX3 1309 aaPredicted RBP18.7■□□□□ 0.58
TUBB3-213ENST00000557262 DLL1O00548 723 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 ZNF213O14771 459 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 DYNC1LI2O43237 492 aaPredicted RBP18.69■□□□□ 0.58
TUBB3-213ENST00000557262 PDHBP11177 359 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 SMPD1P17405 629 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 BAATQ14032 418 aaPredicted RBP18.69■□□□□ 0.58
TUBB3-213ENST00000557262 EEPD1Q7L9B9 569 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 ESR2Q92731 530 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 PURBQ96QR8 312 aaKnown RBP18.69■□□□□ 0.58
TUBB3-213ENST00000557262 SEMA6BQ9H3T3 888 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 PDGFCQ9NRA1 345 aa18.69■□□□□ 0.58
TUBB3-213ENST00000557262 ADD3Q9UEY8 706 aaKnown RBP18.69■□□□□ 0.58
TUBB3-213ENST00000557262 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
TUBB3-213ENST00000557262 TLR3O15455 904 aaKnown RBP18.68■□□□□ 0.58
TUBB3-213ENST00000557262 ZEB2O60315 1214 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 CABYRO75952 493 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 ZNF543Q08ER8 600 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 MFSD5Q6N075 450 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 TLK2Q86UE8 772 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 EXOC6Q8TAG9 804 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 VTA1Q9NP79 307 aa18.68■□□□□ 0.58
TUBB3-213ENST00000557262 LOC102724159A0A0B4J2E5 919 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 NFIBO00712 420 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 SNHG28P0DPA3 235 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 NT5C2P49902 561 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 PWP2Q15269 919 aaKnown RBP18.67■□□□□ 0.58
TUBB3-213ENST00000557262 FSCN1Q16658 493 aaKnown RBP18.67■□□□□ 0.58
TUBB3-213ENST00000557262 CCDC178Q5BJE1 867 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 CWC27Q6UX04 472 aaKnown RBP18.67■□□□□ 0.58
TUBB3-213ENST00000557262 CXCL17Q6UXB2 119 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 KIAA1211Q6ZU35 1233 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 FBXO16Q8IX29 292 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-213ENST00000557262 FAM126BQ8IXS8 530 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 SLC43A3Q8NBI5 491 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 DIAPH3Q9NSV4 1193 aa18.67■□□□□ 0.58
TUBB3-213ENST00000557262 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-213ENST00000557262 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-213ENST00000557262 PTPDC1A2A3K4 754 aa18.66■□□□□ 0.58
TUBB3-213ENST00000557262 HIP1O00291 1037 aa18.66■□□□□ 0.58
TUBB3-213ENST00000557262 ALDH5A1P51649 535 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-213ENST00000557262 PPIGQ13427 754 aaKnown RBP eCLIP18.66■□□□□ 0.58
TUBB3-213ENST00000557262 CLEC4DQ8WXI8 215 aa18.66■□□□□ 0.58
TUBB3-213ENST00000557262 CDX2Q99626 313 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-213ENST00000557262 ZKSCAN3Q9BRR0 538 aa18.66■□□□□ 0.58
TUBB3-213ENST00000557262 SEZ6LQ9BYH1 1024 aa18.66■□□□□ 0.58
TUBB3-213ENST00000557262 CD4P01730 458 aa18.65■□□□□ 0.58
TUBB3-213ENST00000557262 ITGA7Q13683 1181 aa18.65■□□□□ 0.58
TUBB3-213ENST00000557262 DUSP28Q4G0W2 176 aa18.65■□□□□ 0.58
TUBB3-213ENST00000557262 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms