RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 WDR18Q9BV38 432 aa7.38□□□□□ -1.23
TMEM260-212ENST00000556810 C9orf78Q9NZ63 289 aaPredicted RBP7.38□□□□□ -1.23
TMEM260-212ENST00000556810 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
TMEM260-212ENST00000556810 GOLGB1Q14789 3259 aaKnown RBP7.38□□□□□ -1.23
TMEM260-212ENST00000556810 KDM6AO15550 1401 aaPredicted RBP7.37□□□□□ -1.23
TMEM260-212ENST00000556810 PI4KAP2A4QPH2 592 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 CYP26A1O43174 497 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 PAX4O43316 350 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 STARD3NLO95772 234 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 TAL1P17542 331 aaPredicted RBP7.37□□□□□ -1.23
TMEM260-212ENST00000556810 ZNF157P51786 506 aaPredicted RBP7.37□□□□□ -1.23
TMEM260-212ENST00000556810 FAAP100Q0VG06 881 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 CEP85Q6P2H3 762 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 G2E3Q7L622 706 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 PI4KAP1Q8N8J0 262 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
TMEM260-212ENST00000556810 ANGEL1Q9UNK9 670 aaKnown RBP7.37□□□□□ -1.23
TMEM260-212ENST00000556810 ITGB4P16144 1822 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 SYNGAP1Q96PV0 1343 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 F6X3S4 739 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 GPR162Q16538 588 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 BEND3Q5T5X7 828 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 TMC7Q7Z402 723 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 ERC1Q8IUD2 1116 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
TMEM260-212ENST00000556810 MEIS3Q99687 375 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
TMEM260-212ENST00000556810 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
TMEM260-212ENST00000556810 DCTN4Q9UJW0 460 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 MAP3K2Q9Y2U5 619 aa7.36□□□□□ -1.23
TMEM260-212ENST00000556810 SHANK3Q9BYB0 1731 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 CEP350Q5VT06 3117 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 KCNQ3O43525 872 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 PRNPP04156 253 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 LIG1P18858 919 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
TMEM260-212ENST00000556810 CYP27A1Q02318 531 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 SLC39A6Q13433 755 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 ZNF827Q17R98 1081 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 DTHD1Q6ZMT9 781 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 PLBD2Q8NHP8 589 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 SMARCC1Q92922 1105 aaPredicted RBP7.35□□□□□ -1.23
TMEM260-212ENST00000556810 LRRCC1Q9C099 1032 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 USP44Q9H0E7 712 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 CCDC86Q9H6F5 360 aaKnown RBP7.35□□□□□ -1.23
TMEM260-212ENST00000556810 CCDC39Q9UFE4 941 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 PPP1R9AQ9ULJ8 1098 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 DAGLAQ9Y4D2 1042 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 BTAF1O14981 1849 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 NHSQ6T4R5 1651 aa7.35□□□□□ -1.23
TMEM260-212ENST00000556810 PAPPAQ13219 1627 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 AFDNP55196 1824 aaKnown RBP7.34□□□□□ -1.23
TMEM260-212ENST00000556810 GRM8O00222 908 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 HSP90B1P14625 803 aaKnown RBP7.34□□□□□ -1.23
TMEM260-212ENST00000556810 FCGRTP55899 365 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 AIMP1Q12904 312 aaKnown RBP7.34□□□□□ -1.23
TMEM260-212ENST00000556810 HSP90AB3PQ58FF7 597 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 PI16Q6UXB8 463 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 ZNF765Q7L2R6 523 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 COPS6Q7L5N1 327 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 VSIG10LQ86VR7 867 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 IPO9Q96P70 1041 aaKnown RBP7.34□□□□□ -1.23
TMEM260-212ENST00000556810 ZC3H12CQ9C0D7 883 aaKnown RBP7.34□□□□□ -1.23
TMEM260-212ENST00000556810 LNPKQ9C0E8 428 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 GPN3Q9UHW5 284 aaPredicted RBP7.34□□□□□ -1.23
TMEM260-212ENST00000556810 ADGRE2Q9UHX3 823 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 C5P01031 1676 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 TNS2Q63HR2 1409 aa7.34□□□□□ -1.23
TMEM260-212ENST00000556810 UTYO14607 1347 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 DYNC1LI2O43237 492 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-212ENST00000556810 GSTP1P09211 210 aaKnown RBP7.33□□□□□ -1.24
TMEM260-212ENST00000556810 MYL6BP14649 208 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 MTX1Q13505 466 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 BECN1Q14457 450 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 KIF6Q6ZMV9 814 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 ABI1Q8IZP0 508 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 SSH3Q8TE77 659 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 KIF1BPQ96EK5 621 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-212ENST00000556810 GPATCH3Q96I76 525 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 C1GALT1Q9NS00 363 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 BSDC1Q9NW68 430 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-212ENST00000556810 CRIM1Q9NZV1 1036 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 USP16Q9Y5T5 823 aa7.33□□□□□ -1.24
TMEM260-212ENST00000556810 LRRFIP2Q9Y608 721 aaKnown RBP7.33□□□□□ -1.24
TMEM260-212ENST00000556810 SRGAP3O43295 1099 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 ZNF862O60290 1169 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 SLFN14P0C7P3 912 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 XRCC5P13010 732 aaKnown RBP7.32□□□□□ -1.24
TMEM260-212ENST00000556810 POLD1P28340 1107 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 PPP2R3AQ06190 1150 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 G3BP1Q13283 466 aaKnown RBP eCLIP7.32□□□□□ -1.24
TMEM260-212ENST00000556810 OS9Q13438 667 aaPredicted RBP7.32□□□□□ -1.24
TMEM260-212ENST00000556810 NFXL1Q6ZNB6 911 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 SIRT2Q8IXJ6 389 aa7.32□□□□□ -1.24
TMEM260-212ENST00000556810 CCDC191Q8NCU4 936 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms