RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TMEM39AQ9NV64 488 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 CYP39A1Q9NYL5 469 aa26.62■■□□□ 1.85
ACTN1-220ENST00000556433 DCDC2CA8MYV0 355 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 KIAA0355O15063 1070 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 ITGB8P26012 769 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 TNFAIP2Q03169 654 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 C9orf50Q5SZB4 431 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 CWC27Q6UX04 472 aaKnown RBP26.61■■□□□ 1.85
ACTN1-220ENST00000556433 NSMFQ6X4W1 530 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 NOL8Q76FK4 1167 aaKnown RBP26.61■■□□□ 1.85
ACTN1-220ENST00000556433 ANKRD33Q7Z3H0 272 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 TBC1D10CQ8IV04 446 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 VTI1AQ96AJ9 217 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 TOX2Q96NM4 488 aa26.61■■□□□ 1.85
ACTN1-220ENST00000556433 RNF41Q9H4P4 317 aaPredicted RBP26.61■■□□□ 1.85
ACTN1-220ENST00000556433 MCM3APO60318 1980 aa26.6■■□□□ 1.85
ACTN1-220ENST00000556433 ZNF213O14771 459 aa26.6■■□□□ 1.85
ACTN1-220ENST00000556433 ASGR1P07306 291 aa26.6■■□□□ 1.85
ACTN1-220ENST00000556433 RAG1P15918 1043 aa26.6■■□□□ 1.85
ACTN1-220ENST00000556433 DIAPH3Q9NSV4 1193 aa26.6■■□□□ 1.85
ACTN1-220ENST00000556433 ELP1O95163 1332 aa26.6■■□□□ 1.85
ACTN1-220ENST00000556433 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.59■■□□□ 1.85
ACTN1-220ENST00000556433 PDHBP11177 359 aa26.59■■□□□ 1.85
ACTN1-220ENST00000556433 FAAP100Q0VG06 881 aa26.59■■□□□ 1.85
ACTN1-220ENST00000556433 SLC17A8Q8NDX2 589 aa26.59■■□□□ 1.85
ACTN1-220ENST00000556433 DDX49Q9Y6V7 483 aaKnown RBP26.59■■□□□ 1.85
ACTN1-220ENST00000556433 LTBP2Q14767 1821 aa26.59■■□□□ 1.85
ACTN1-220ENST00000556433 ESR2Q92731 530 aa26.58■■□□□ 1.85
ACTN1-220ENST00000556433 PURBQ96QR8 312 aaKnown RBP26.58■■□□□ 1.85
ACTN1-220ENST00000556433 ASTN1O14525 1302 aa26.58■■□□□ 1.85
ACTN1-220ENST00000556433 HIP1O00291 1037 aa26.57■■□□□ 1.84
ACTN1-220ENST00000556433 BAATQ14032 418 aaPredicted RBP26.57■■□□□ 1.84
ACTN1-220ENST00000556433 FAM109BQ6ICB4 259 aaPredicted RBP26.57■■□□□ 1.84
ACTN1-220ENST00000556433 EEPD1Q7L9B9 569 aa26.57■■□□□ 1.84
ACTN1-220ENST00000556433 CTAGE5O15320 804 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 CDK7P50613 346 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 NKX3-2P78367 333 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 BEX3Q00994 111 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 ZNF543Q08ER8 600 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 ZKSCAN3Q9BRR0 538 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 AP5M1Q9H0R1 490 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 PDGFCQ9NRA1 345 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 GNEQ9Y223 722 aaKnown RBP26.56■■□□□ 1.84
ACTN1-220ENST00000556433 STXBP5LQ9Y2K9 1186 aa26.56■■□□□ 1.84
ACTN1-220ENST00000556433 A0A0U1RQG5 324 aaPredicted RBP26.55■■□□□ 1.84
ACTN1-220ENST00000556433 IQSEC1Q6DN90 963 aa26.55■■□□□ 1.84
ACTN1-220ENST00000556433 NEDD4P46934 1319 aa26.55■■□□□ 1.84
ACTN1-220ENST00000556433 ARVCFO00192 962 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 NFIBO00712 420 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 DYNC1LI2O43237 492 aaPredicted RBP26.54■■□□□ 1.84
ACTN1-220ENST00000556433 SNHG28P0DPA3 235 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 SMPD1P17405 629 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 EPHB4P54760 987 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 FPGSQ05932 587 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 TAPT1Q6NXT6 567 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 DGKHQ86XP1 1220 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 FBXO16Q8IX29 292 aaPredicted RBP26.54■■□□□ 1.84
ACTN1-220ENST00000556433 FAM161BQ96MY7 647 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 ADD3Q9UEY8 706 aaKnown RBP26.54■■□□□ 1.84
ACTN1-220ENST00000556433 PNMA2Q9UL42 364 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 SUPT16HQ9Y5B9 1047 aaKnown RBP26.54■■□□□ 1.84
ACTN1-220ENST00000556433 MROH7Q68CQ1 1323 aa26.54■■□□□ 1.84
ACTN1-220ENST00000556433 PTPDC1A2A3K4 754 aa26.53■■□□□ 1.84
ACTN1-220ENST00000556433 TLK2Q86UE8 772 aa26.53■■□□□ 1.84
ACTN1-220ENST00000556433 MORC4Q8TE76 937 aa26.53■■□□□ 1.84
ACTN1-220ENST00000556433 VTA1Q9NP79 307 aa26.53■■□□□ 1.84
ACTN1-220ENST00000556433 KDM4AO75164 1064 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 TIMP1P01033 207 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 PTGS1P23219 599 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 NT5C2P49902 561 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 CCDC178Q5BJE1 867 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 CXCL17Q6UXB2 119 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 KIAA1211Q6ZU35 1233 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 IQCA1Q86XH1 822 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 CLEC4DQ8WXI8 215 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 DSCC1Q9BVC3 393 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 TBX21Q9UL17 535 aa26.52■■□□□ 1.84
ACTN1-220ENST00000556433 GOLGA8HP0CJ92 632 aa26.51■■□□□ 1.83
ACTN1-220ENST00000556433 CALML3P27482 149 aa26.51■■□□□ 1.83
ACTN1-220ENST00000556433 ALDH5A1P51649 535 aaPredicted RBP26.51■■□□□ 1.83
ACTN1-220ENST00000556433 FSCN1Q16658 493 aaKnown RBP26.51■■□□□ 1.83
ACTN1-220ENST00000556433 GPATCH4Q5T3I0 446 aaKnown RBP26.51■■□□□ 1.83
ACTN1-220ENST00000556433 ZNF697Q5TEC3 545 aa26.51■■□□□ 1.83
ACTN1-220ENST00000556433 RNPC3Q96LT9 517 aaKnown RBP26.51■■□□□ 1.83
ACTN1-220ENST00000556433 CTNNA3Q9UI47 895 aa26.51■■□□□ 1.83
ACTN1-220ENST00000556433 Q9Y3F1 56 aa26.51■■□□□ 1.83
ACTN1-220ENST00000556433 TLR3O15455 904 aaKnown RBP26.5■■□□□ 1.83
ACTN1-220ENST00000556433 ZEB2O60315 1214 aa26.5■■□□□ 1.83
ACTN1-220ENST00000556433 CABYRO75952 493 aa26.5■■□□□ 1.83
ACTN1-220ENST00000556433 SMAD3P84022 425 aaKnown RBP26.5■■□□□ 1.83
ACTN1-220ENST00000556433 IMMTQ16891 758 aaKnown RBP26.5■■□□□ 1.83
ACTN1-220ENST00000556433 TMEM63BQ5T3F8 832 aa26.5■■□□□ 1.83
ACTN1-220ENST00000556433 RNF207Q6ZRF8 634 aa26.5■■□□□ 1.83
ACTN1-220ENST00000556433 GUCD1Q96NT3 240 aa26.5■■□□□ 1.83
ACTN1-220ENST00000556433 UBA5Q9GZZ9 404 aa26.5■■□□□ 1.83
ACTN1-220ENST00000556433 WDR19Q8NEZ3 1342 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 B4E1Z4 1266 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 MFSD5Q6N075 450 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 SLC30A10Q6XR72 485 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 FAM126BQ8IXS8 530 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms