RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 BACH2Q9BYV9 841 aa6.58□□□□□ -1.36
SCFD1-219ENST00000556413 LUC7LQ9NQ29 371 aaKnown RBP6.58□□□□□ -1.36
SCFD1-219ENST00000556413 ZNF451Q9Y4E5 1061 aa6.58□□□□□ -1.36
SCFD1-219ENST00000556413 HCFC2Q9Y5Z7 792 aa6.58□□□□□ -1.36
SCFD1-219ENST00000556413 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 CYBBP04839 570 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 ZNF16P17020 682 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-219ENST00000556413 GUCY2CP25092 1073 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
SCFD1-219ENST00000556413 SKOR2Q2VWA4 1001 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-219ENST00000556413 PAQR3Q6TCH7 311 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 RUFY4Q6ZNE9 571 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 FIBCD1Q8N539 461 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 FAM86C1Q9NVL1 165 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 PPT2Q9UMR5 302 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 PCDHGB7Q9Y5F8 929 aa6.57□□□□□ -1.36
SCFD1-219ENST00000556413 FFAR3O14843 346 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 IFNGR1P15260 489 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 PFKLP17858 780 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 FBLN1P23142 703 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 LIMS1P48059 325 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 PDLIM7Q9NR12 457 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 PLA2G2DQ9UNK4 145 aa6.56□□□□□ -1.36
SCFD1-219ENST00000556413 CAP1Q01518 475 aa6.55□□□□□ -1.36
SCFD1-219ENST00000556413 BICRALQ6AI39 1079 aa6.55□□□□□ -1.36
SCFD1-219ENST00000556413 PTCHD1Q96NR3 888 aa6.55□□□□□ -1.36
SCFD1-219ENST00000556413 ADAM7Q9H2U9 754 aa6.55□□□□□ -1.36
SCFD1-219ENST00000556413 NOL6Q9H6R4 1146 aaKnown RBP6.55□□□□□ -1.36
SCFD1-219ENST00000556413 ZNF214Q9UL59 606 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-219ENST00000556413 SF3B6Q9Y3B4 125 aaKnown RBP6.55□□□□□ -1.36
SCFD1-219ENST00000556413 A0A1W2PQJ5 194 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 CBFA2T2O43439 604 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 CD3EP07766 207 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 ITGA4P13612 1032 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 TACR1P25103 407 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 CORO7P57737 925 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 RACK1P63244 317 aaKnown RBP6.54□□□□□ -1.36
SCFD1-219ENST00000556413 TARBP2Q15633 366 aaKnown RBP6.54□□□□□ -1.36
SCFD1-219ENST00000556413 LSRQ86X29 649 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-219ENST00000556413 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
SCFD1-219ENST00000556413 METTL5Q9NRN9 209 aaKnown RBP6.54□□□□□ -1.36
SCFD1-219ENST00000556413 LTBP3Q9NS15 1303 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 A0A087WZG4 1122 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 ZC3H12DA2A288 527 aaKnown RBP6.53□□□□□ -1.36
SCFD1-219ENST00000556413 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-219ENST00000556413 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 CELA3BP08861 270 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 ATF2P15336 505 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 PRR5P85299 388 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 POU4F1Q01851 419 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 ZDHHC15Q96MV8 337 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 JAG2Q9Y219 1238 aa6.53□□□□□ -1.36
SCFD1-219ENST00000556413 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
SCFD1-219ENST00000556413 L1CAMP32004 1257 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 SLURP1P55000 103 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 FOXO4P98177 505 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 TCEAL1Q15170 157 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 VWA3BQ502W6 1294 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 FRMD5Q7Z6J6 570 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 MCMBPQ9BTE3 642 aa6.52□□□□□ -1.37
SCFD1-219ENST00000556413 DIS3Q9Y2L1 958 aaKnown RBP6.52□□□□□ -1.37
SCFD1-219ENST00000556413 KCNC1P48547 511 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 PPP2R5DQ14738 602 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 CCDC81Q6ZN84 652 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 PRRT2Q7Z6L0 340 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-219ENST00000556413 FNIP1Q8TF40 1166 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 RNF34Q969K3 372 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 HAUS7Q99871 368 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 SUSD2Q9UGT4 822 aa6.51□□□□□ -1.37
SCFD1-219ENST00000556413 DDX41Q9UJV9 622 aaKnown RBP6.51□□□□□ -1.37
SCFD1-219ENST00000556413 GLI4P10075 376 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 MC3RP41968 323 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 NFKB2Q00653 900 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 ERICH6BQ5W0A0 696 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 RCSD1Q6JBY9 416 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 ADGRG2Q8IZP9 1017 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 ADCY4Q8NFM4 1077 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 RNF38Q9H0F5 515 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 GINM1Q9NU53 330 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 WHRNQ9P202 907 aa6.5□□□□□ -1.37
SCFD1-219ENST00000556413 DBR1Q9UK59 544 aaKnown RBP6.5□□□□□ -1.37
SCFD1-219ENST00000556413 A0A1B0GTL3 188 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 AURKAO14965 403 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 ASGR2P07307 311 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 NCAM1P13591 858 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 HTRA3P83110 453 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 GNPTABQ3T906 1256 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 EEF1DP3Q658K8 133 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 DBX2Q6ZNG2 339 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 KLHL25Q9H0H3 589 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 FBLN5Q9UBX5 448 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 PMF1-BGLAPU3KQ54 211 aa6.49□□□□□ -1.37
SCFD1-219ENST00000556413 PRICKLE3O43900 615 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-219ENST00000556413 VAMP4O75379 141 aa6.48□□□□□ -1.37
SCFD1-219ENST00000556413 COL9A2Q14055 689 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms