RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 RASA3Q14644 834 aa16.71■□□□□ 0.27
VPS33B-205ENST00000556096 QRICH1Q2TAL8 776 aa16.71■□□□□ 0.27
VPS33B-205ENST00000556096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
VPS33B-205ENST00000556096 ADM5C9JUS6 153 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 AP5Z1O43299 807 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 SLFN14P0C7P3 912 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 POSTNQ15063 836 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 JAKMIP3Q5VZ66 844 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 DTHD1Q6ZMT9 781 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 TBCKQ8TEA7 893 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 CUL5Q93034 780 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 GLIS2Q9BZE0 524 aaPredicted RBP16.7■□□□□ 0.26
VPS33B-205ENST00000556096 GOPCQ9HD26 462 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 PCDHA5Q9Y5H7 936 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 A0A087X0B3 334 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 GOLGA6L19H0YKK7 550 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
VPS33B-205ENST00000556096 DPCR1Q3MIW9 517 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 SYDE2Q5VT97 1194 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 PRAMEF18Q5VWM3 479 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 LDHDQ86WU2 507 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 PDILTQ8N807 584 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 TEPSINQ96N21 525 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 TMEM260Q9NX78 707 aa16.7■□□□□ 0.26
VPS33B-205ENST00000556096 ATAD5Q96QE3 1844 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 BECN2A8MW95 431 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 TMEM232C9JQI7 657 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 TRAF5O00463 557 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 ASNSP08243 561 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
VPS33B-205ENST00000556096 LETM2Q2VYF4 491 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 DHX40Q8IX18 779 aaKnown RBP16.69■□□□□ 0.26
VPS33B-205ENST00000556096 SPATA20Q8TB22 786 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 SH2D4AQ9H788 454 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 GINM1Q9NU53 330 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
VPS33B-205ENST00000556096 A0A087WWV3 80 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 PHF20L1A8MW92 1017 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 BIN1O00499 593 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 FOXN1O15353 648 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 CCNT1O60563 726 aaKnown RBP16.68■□□□□ 0.26
VPS33B-205ENST00000556096 ECE1P42892 770 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 MCTP2Q6DN12 878 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 APOBEC3FQ8IUX4 373 aaKnown RBP16.68■□□□□ 0.26
VPS33B-205ENST00000556096 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 DHX58Q96C10 678 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 DCPSQ96C86 337 aaKnown RBP16.68■□□□□ 0.26
VPS33B-205ENST00000556096 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
VPS33B-205ENST00000556096 AMNQ9BXJ7 453 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 DEFB129Q9H1M3 183 aa16.68■□□□□ 0.26
VPS33B-205ENST00000556096 NEMFO60524 1076 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 PLA2G6O60733 806 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 OR52Z1P0C646 297 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 TXLNAP40222 546 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 E2F4Q16254 413 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 SARM1Q6SZW1 724 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 AK8Q96MA6 479 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 TRAF1Q13077 416 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 IKQ13123 557 aaPredicted RBP16.67■□□□□ 0.26
VPS33B-205ENST00000556096 KRT26Q7Z3Y9 468 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 TEX2Q8IWB9 1127 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 CCSER1Q9C0I3 900 aa16.67■□□□□ 0.26
VPS33B-205ENST00000556096 SMTNL1A8MU46 457 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 EDIL3O43854 480 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 TOMM70O94826 608 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 SMC2O95347 1197 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 STAT2P52630 851 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 PPP4R3AQ6IN85 833 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 AOPEPQ8N6M6 819 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 NAP1L4Q99733 375 aaKnown RBP16.66■□□□□ 0.26
VPS33B-205ENST00000556096 MAN1B1Q9UKM7 699 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
VPS33B-205ENST00000556096 ESPNB1AK53 854 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 IKBKBO14920 756 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 UBE2SQ16763 222 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 KIAA1755Q5JYT7 1200 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 PLA2G4DQ86XP0 818 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 SULF1Q8IWU6 871 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 ZC3H15Q8WU90 426 aaKnown RBP16.65■□□□□ 0.26
VPS33B-205ENST00000556096 CHURC1Q8WUH1 139 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 MTMR9Q96QG7 549 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
VPS33B-205ENST00000556096 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
VPS33B-205ENST00000556096 C1QTNF8P60827 252 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms