RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 C11orf49Q9H6J7 331 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 HMX1Q9NP08 348 aaPredicted RBP7.54□□□□□ -1.2
TMEM260-209ENST00000556079 GPHNQ9NQX3 736 aaPredicted RBP7.54□□□□□ -1.2
TMEM260-209ENST00000556079 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 IVNS1ABPQ9Y6Y0 642 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 MYH6P13533 1939 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 ASTN1O14525 1302 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 ZMYM6O95789 1325 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 GTPBP6O43824 516 aaPredicted RBP7.53□□□□□ -1.2
TMEM260-209ENST00000556079 SLC3A2P08195 630 aaKnown RBP7.53□□□□□ -1.2
TMEM260-209ENST00000556079 HOXC6P09630 235 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 XRCC5P13010 732 aaKnown RBP7.53□□□□□ -1.2
TMEM260-209ENST00000556079 NOVP48745 357 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 IKQ13123 557 aaPredicted RBP7.53□□□□□ -1.2
TMEM260-209ENST00000556079 SLC35G1Q2M3R5 365 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 GJC2Q5T442 439 aaPredicted RBP7.53□□□□□ -1.2
TMEM260-209ENST00000556079 CHST3Q7LGC8 479 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 DPP9Q86TI2 863 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 SPNS2Q8IVW8 549 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 PLPP6Q8IY26 295 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 ANKLE1Q8NAG6 615 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 STAG1Q8WVM7 1258 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
TMEM260-209ENST00000556079 SLC38A10Q9HBR0 1119 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 MTMR10Q9NXD2 777 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 OGDHLQ9ULD0 1010 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 TTC28Q96AY4 2481 aa7.53□□□□□ -1.2
TMEM260-209ENST00000556079 MYADML2A6NDP7 307 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 ZBED4O75132 1171 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 FCER1AP12319 257 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 ALAS1P13196 640 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 SLC1A4P43007 532 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 MDM2Q00987 491 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-209ENST00000556079 DSG2Q14126 1118 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 LRRC26Q2I0M4 334 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 LRIT3Q3SXY7 679 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 MFSD14CQ5VZR4 134 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 MFSD6Q6ZSS7 791 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 MB21D1Q8N884 522 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 ENAHQ8N8S7 591 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-209ENST00000556079 PRPF38AQ8NAV1 312 aaKnown RBP7.52□□□□□ -1.21
TMEM260-209ENST00000556079 GMCL1Q96IK5 515 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 TEX13BQ9BXU2 312 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 UBA5Q9GZZ9 404 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 MROH8Q9H579 483 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 RNF146Q9NTX7 359 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 FEM1BQ9UK73 627 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 STXBP5LQ9Y2K9 1186 aa7.52□□□□□ -1.21
TMEM260-209ENST00000556079 DNAJC25-GNG10A0A024R161 153 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 SOWAHBA6NEL2 793 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 NFIBO00712 420 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 ZNF213O14771 459 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 SGSM2O43147 1006 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 SNAI1O95863 264 aaPredicted RBP7.51□□□□□ -1.21
TMEM260-209ENST00000556079 PGK1P00558 417 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 CYP21A2P08686 494 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 ZNF865P0CJ78 1059 aaPredicted RBP7.51□□□□□ -1.21
TMEM260-209ENST00000556079 PDHBP11177 359 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 TOP1P11387 765 aaKnown RBP7.51□□□□□ -1.21
TMEM260-209ENST00000556079 COL6A1P12109 1028 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 CAPN2P17655 700 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 STAT2P52630 851 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 ANTXR2P58335 489 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 FOXK1P85037 733 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 KCTD2Q14681 263 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 SYDE2Q5VT97 1194 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 OLFML2BQ68BL8 750 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 SLC30A10Q6XR72 485 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 RAB11FIP4Q86YS3 637 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 STAG2Q8N3U4 1231 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 PPP1R13LQ8WUF5 828 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 FERMT2Q96AC1 680 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 FAM161BQ96MY7 647 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 ZNF287Q9HBT7 754 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
TMEM260-209ENST00000556079 ZSWIM5Q9P217 1185 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 DDX20Q9UHI6 824 aaKnown RBP7.51□□□□□ -1.21
TMEM260-209ENST00000556079 RBM8AQ9Y5S9 174 aaKnown RBP7.51□□□□□ -1.21
TMEM260-209ENST00000556079 TNKSO95271 1327 aa7.51□□□□□ -1.21
TMEM260-209ENST00000556079 LTBP2Q14767 1821 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-209ENST00000556079 SLC25A27O95847 323 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 ZNF543Q08ER8 600 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 USH1GQ495M9 461 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 NSMFQ6X4W1 530 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 EEPD1Q7L9B9 569 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 DCAF4Q8WV16 495 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 TBC1D5Q92609 795 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 TRERF1Q96PN7 1200 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 ZSCAN10Q96SZ4 725 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-209ENST00000556079 TINF2Q9BSI4 451 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-209ENST00000556079 LSG1Q9H089 658 aaKnown RBP7.5□□□□□ -1.21
TMEM260-209ENST00000556079 PDGFCQ9NRA1 345 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms