RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 CHMP4CQ96CF2 233 aa20.92■□□□□ 0.94
NPC2-208ENST00000556009 RNPC3Q96LT9 517 aaKnown RBP20.92■□□□□ 0.94
NPC2-208ENST00000556009 CDX2Q99626 313 aaPredicted RBP20.92■□□□□ 0.94
NPC2-208ENST00000556009 GNEQ9Y223 722 aaKnown RBP20.92■□□□□ 0.94
NPC2-208ENST00000556009 TMEM265A0A087WTH1 108 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 ZMYM6O95789 1325 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 ICAM1P05362 532 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 MUM1L1Q5H9M0 696 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 MFSD5Q6N075 450 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 RASGRP2Q7LDG7 609 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 VTI1AQ96AJ9 217 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 FAM227BQ96M60 508 aa20.91■□□□□ 0.94
NPC2-208ENST00000556009 ASTN1O14525 1302 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 CABYRO75952 493 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 HSPD1P10809 573 aaKnown RBP20.9■□□□□ 0.94
NPC2-208ENST00000556009 TOP1P11387 765 aaKnown RBP20.9■□□□□ 0.94
NPC2-208ENST00000556009 SNAP25P60880 206 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 IQSEC1Q6DN90 963 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 FAM126BQ8IXS8 530 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 MORC4Q8TE76 937 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 SEZ6LQ9BYH1 1024 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 RANBP17Q9H2T7 1088 aaKnown RBP20.9■□□□□ 0.94
NPC2-208ENST00000556009 TTYH1Q9H313 450 aaPredicted RBP20.9■□□□□ 0.94
NPC2-208ENST00000556009 CCPG1Q9ULG6 757 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 Q9Y3F1 56 aa20.9■□□□□ 0.94
NPC2-208ENST00000556009 A0A0D9SFI3 127 aa20.89■□□□□ 0.93
NPC2-208ENST00000556009 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.89■□□□□ 0.93
NPC2-208ENST00000556009 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.89■□□□□ 0.93
NPC2-208ENST00000556009 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.89■□□□□ 0.93
NPC2-208ENST00000556009 PCP11498 1178 aaKnown RBP20.89■□□□□ 0.93
NPC2-208ENST00000556009 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.93
NPC2-208ENST00000556009 SLC43A3Q8NBI5 491 aa20.89■□□□□ 0.93
NPC2-208ENST00000556009 TTC14Q96N46 770 aa20.89■□□□□ 0.93
NPC2-208ENST00000556009 TMEM47Q9BQJ4 181 aa20.89■□□□□ 0.93
NPC2-208ENST00000556009 PRUNE2Q8WUY3 3088 aa20.89■□□□□ 0.93
NPC2-208ENST00000556009 LOC102724159A0A0B4J2E5 919 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 TLR3O15455 904 aaKnown RBP20.88■□□□□ 0.93
NPC2-208ENST00000556009 CD4P01730 458 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 BEX3Q00994 111 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 PWP2Q15269 919 aaKnown RBP20.88■□□□□ 0.93
NPC2-208ENST00000556009 CCDC96Q2M329 555 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 TTBK2Q6IQ55 1244 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 NOL8Q76FK4 1167 aaKnown RBP20.88■□□□□ 0.93
NPC2-208ENST00000556009 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.88■□□□□ 0.93
NPC2-208ENST00000556009 AP5M1Q9H0R1 490 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 TOMM22Q9NS69 142 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 PNMA2Q9UL42 364 aa20.88■□□□□ 0.93
NPC2-208ENST00000556009 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
NPC2-208ENST00000556009 SMPD1P17405 629 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 NMIQ13287 307 aaPredicted RBP20.87■□□□□ 0.93
NPC2-208ENST00000556009 PPIGQ13427 754 aaKnown RBP eCLIP20.87■□□□□ 0.93
NPC2-208ENST00000556009 SYDE2Q5VT97 1194 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 NSMFQ6X4W1 530 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 C16orf59Q7L2K0 433 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 TLK2Q86UE8 772 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 TMEM199Q8N511 208 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.93
NPC2-208ENST00000556009 VTA1Q9NP79 307 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 PDGFCQ9NRA1 345 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 MTMR7Q9Y216 660 aa20.87■□□□□ 0.93
NPC2-208ENST00000556009 DYNC1LI2O43237 492 aaPredicted RBP20.86■□□□□ 0.93
NPC2-208ENST00000556009 ZEB2O60315 1214 aa20.86■□□□□ 0.93
NPC2-208ENST00000556009 SLC16A2P36021 539 aa20.86■□□□□ 0.93
NPC2-208ENST00000556009 FSCN1Q16658 493 aaKnown RBP20.86■□□□□ 0.93
NPC2-208ENST00000556009 RRP12Q5JTH9 1297 aaKnown RBP20.86■□□□□ 0.93
NPC2-208ENST00000556009 ZNF589Q86UQ0 364 aaPredicted RBP20.86■□□□□ 0.93
NPC2-208ENST00000556009 SMC5Q8IY18 1101 aa20.86■□□□□ 0.93
NPC2-208ENST00000556009 ADD3Q9UEY8 706 aaKnown RBP20.86■□□□□ 0.93
NPC2-208ENST00000556009 CCDC171Q6TFL3 1326 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 PDHBP11177 359 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 PTGS1P23219 599 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 NT5C2P49902 561 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 MFAP1P55081 439 aaKnown RBP20.85■□□□□ 0.93
NPC2-208ENST00000556009 BAATQ14032 418 aaPredicted RBP20.85■□□□□ 0.93
NPC2-208ENST00000556009 TMEM240Q5SV17 173 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 AKNAD1Q5T1N1 836 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 RASIP1Q5U651 963 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 CXCL17Q6UXB2 119 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 MFSD6Q6ZSS7 791 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 MYLIPQ8WY64 445 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 LNPKQ9C0E8 428 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 OSBPL3Q9H4L5 887 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 VCANP13611 3396 aa20.85■□□□□ 0.93
NPC2-208ENST00000556009 LAMA4Q16363 1823 aa20.84■□□□□ 0.93
NPC2-208ENST00000556009 SNHG28P0DPA3 235 aa20.84■□□□□ 0.93
NPC2-208ENST00000556009 ITGA7Q13683 1181 aa20.84■□□□□ 0.93
NPC2-208ENST00000556009 EEPD1Q7L9B9 569 aa20.84■□□□□ 0.93
NPC2-208ENST00000556009 FBXO16Q8IX29 292 aaPredicted RBP20.84■□□□□ 0.93
NPC2-208ENST00000556009 PURBQ96QR8 312 aaKnown RBP20.84■□□□□ 0.93
NPC2-208ENST00000556009 COL25A1Q9BXS0 654 aaPredicted RBP20.84■□□□□ 0.93
NPC2-208ENST00000556009 RWDD1Q9H446 243 aaPredicted RBP20.84■□□□□ 0.93
NPC2-208ENST00000556009 GPCPD1Q9NPB8 672 aa20.84■□□□□ 0.93
NPC2-208ENST00000556009 GRIN2DO15399 1336 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 FRMPD2Q68DX3 1309 aaPredicted RBP20.83■□□□□ 0.93
NPC2-208ENST00000556009 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 CSF2RAP15509 400 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 SDSP20132 328 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 ALDH5A1P51649 535 aaPredicted RBP20.83■□□□□ 0.93
NPC2-208ENST00000556009 HAND2P61296 217 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 ZNF543Q08ER8 600 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms