RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MTMR7Q9Y216 660 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 ASTN1O14525 1302 aa23.27■■□□□ 1.32
PRKCH-219ENST00000555906 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
PRKCH-219ENST00000555906 SNAP25P60880 206 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 IRX5P78411 483 aaPredicted RBP23.26■■□□□ 1.31
PRKCH-219ENST00000555906 ZNF697Q5TEC3 545 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 RILPL2Q969X0 211 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 TMEM47Q9BQJ4 181 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 OSBPL3Q9H4L5 887 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 UNC80Q8N2C7 3258 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 A0A0C4DFX4 3053 aa23.26■■□□□ 1.31
PRKCH-219ENST00000555906 A0A0U1RQG5 324 aaPredicted RBP23.25■■□□□ 1.31
PRKCH-219ENST00000555906 CTAGE5O15320 804 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 HAND2P61296 217 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 SMAD3P84022 425 aaKnown RBP23.25■■□□□ 1.31
PRKCH-219ENST00000555906 FPGSQ05932 587 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 AKNAD1Q5T1N1 836 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 SYDE2Q5VT97 1194 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 CHD1LQ86WJ1 897 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 GUCD1Q96NT3 240 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 TBX21Q9UL17 535 aa23.25■■□□□ 1.31
PRKCH-219ENST00000555906 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-219ENST00000555906 PDHBP11177 359 aa23.24■■□□□ 1.31
PRKCH-219ENST00000555906 TNFAIP2Q03169 654 aa23.24■■□□□ 1.31
PRKCH-219ENST00000555906 GNASQ5JWF2 1037 aa23.24■■□□□ 1.31
PRKCH-219ENST00000555906 TBC1D10CQ8IV04 446 aa23.24■■□□□ 1.31
PRKCH-219ENST00000555906 RNF41Q9H4P4 317 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-219ENST00000555906 GNEQ9Y223 722 aaKnown RBP23.24■■□□□ 1.31
PRKCH-219ENST00000555906 SDSP20132 328 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 SLC16A2P36021 539 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 NT5C2P49902 561 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 CDK7P50613 346 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 NUCB1Q02818 461 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 TTBK2Q6IQ55 1244 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 B4GALNT3Q6L9W6 998 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 NSMFQ6X4W1 530 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 MFSD6Q6ZSS7 791 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 TLK2Q86UE8 772 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 PLEKHM2Q8IWE5 1019 aa23.23■■□□□ 1.31
PRKCH-219ENST00000555906 RNPC3Q96LT9 517 aaKnown RBP23.23■■□□□ 1.31
PRKCH-219ENST00000555906 FRMPD2Q68DX3 1309 aaPredicted RBP23.23■■□□□ 1.31
PRKCH-219ENST00000555906 CUL9Q8IWT3 2517 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 ARVCFO00192 962 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 EPHB4P54760 987 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 FBXO16Q8IX29 292 aaPredicted RBP23.22■■□□□ 1.31
PRKCH-219ENST00000555906 MORC4Q8TE76 937 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
PRKCH-219ENST00000555906 TTC14Q96N46 770 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 VTA1Q9NP79 307 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 PNMA2Q9UL42 364 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 EYSQ5T1H1 3165 aa23.22■■□□□ 1.31
PRKCH-219ENST00000555906 LOC102724159A0A0B4J2E5 919 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 TIMP1P01033 207 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 SNHG28P0DPA3 235 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 PWP2Q15269 919 aaKnown RBP23.21■■□□□ 1.31
PRKCH-219ENST00000555906 FAM126BQ8IXS8 530 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 ESR2Q92731 530 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 FAM161BQ96MY7 647 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 GPCPD1Q9NPB8 672 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 NEDD4P46934 1319 aa23.21■■□□□ 1.31
PRKCH-219ENST00000555906 MYH6P13533 1939 aa23.2■■□□□ 1.3
PRKCH-219ENST00000555906 WDR19Q8NEZ3 1342 aa23.2■■□□□ 1.3
PRKCH-219ENST00000555906 BEX3Q00994 111 aa23.2■■□□□ 1.3
PRKCH-219ENST00000555906 ZNF543Q08ER8 600 aa23.2■■□□□ 1.3
PRKCH-219ENST00000555906 NOL8Q76FK4 1167 aaKnown RBP23.2■■□□□ 1.3
PRKCH-219ENST00000555906 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
PRKCH-219ENST00000555906 Q9Y3F1 56 aa23.2■■□□□ 1.3
PRKCH-219ENST00000555906 TMEM265A0A087WTH1 108 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 NFIBO00712 420 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 TLR3O15455 904 aaKnown RBP23.19■■□□□ 1.3
PRKCH-219ENST00000555906 CABYRO75952 493 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 IGHDP01880 384 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 SMPD1P17405 629 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 FSCN1Q16658 493 aaKnown RBP23.19■■□□□ 1.3
PRKCH-219ENST00000555906 MFSD5Q6N075 450 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 TAPT1Q6NXT6 567 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 VTI1AQ96AJ9 217 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 AP5M1Q9H0R1 490 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
PRKCH-219ENST00000555906 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
PRKCH-219ENST00000555906 HIP1O00291 1037 aa23.18■■□□□ 1.3
PRKCH-219ENST00000555906 ALDH5A1P51649 535 aaPredicted RBP23.18■■□□□ 1.3
PRKCH-219ENST00000555906 BAATQ14032 418 aaPredicted RBP23.18■■□□□ 1.3
PRKCH-219ENST00000555906 IQSEC1Q6DN90 963 aa23.18■■□□□ 1.3
PRKCH-219ENST00000555906 EEPD1Q7L9B9 569 aa23.18■■□□□ 1.3
PRKCH-219ENST00000555906 SLC43A3Q8NBI5 491 aa23.18■■□□□ 1.3
PRKCH-219ENST00000555906 PURBQ96QR8 312 aaKnown RBP23.18■■□□□ 1.3
PRKCH-219ENST00000555906 PDGFCQ9NRA1 345 aa23.18■■□□□ 1.3
PRKCH-219ENST00000555906 ZNF213O14771 459 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 ZEB2O60315 1214 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 PPIGQ13427 754 aaKnown RBP eCLIP23.17■■□□□ 1.3
PRKCH-219ENST00000555906 GPATCH4Q5T3I0 446 aaKnown RBP23.17■■□□□ 1.3
PRKCH-219ENST00000555906 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
PRKCH-219ENST00000555906 CXCL17Q6UXB2 119 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 SLC30A10Q6XR72 485 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 EXOC6Q8TAG9 804 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 CLEC4DQ8WXI8 215 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 SEZ6LQ9BYH1 1024 aa23.17■■□□□ 1.3
PRKCH-219ENST00000555906 PTPDC1A2A3K4 754 aa23.16■■□□□ 1.3
PRKCH-219ENST00000555906 CD4P01730 458 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms