RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PES1O00541 588 aaKnown RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 PSMA7O14818 248 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 ZPR1O75312 459 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 SEC31AO94979 1220 aaKnown RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 BAG3O95817 575 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 LDHBP07195 334 aaKnown RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 TSPY3P0CV98 308 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TSPY8P0CW00 308 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 EEF1GP26641 437 aaKnown RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 KLRK1P26718 216 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 HSPA1LP34931 641 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 PLA2G4AP47712 749 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 GRM4Q14833 912 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TPTE2Q6XPS3 522 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 HEATR3Q7Z4Q2 680 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 LINC00116Q8NCU8 138 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 WDR66Q8TBY9 1149 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 NOC3LQ8WTT2 800 aaKnown RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.152e-6■■■□□ 15.9
TDP1-213ENST00000555880 DDX27Q96GQ7 796 aaKnown RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 CUEDC2Q9H467 287 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 MAGEF1Q9HAY2 307 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 COL24A1Q17RW2 1714 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 AFF2P51816 1311 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TUBBP07437 444 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 KRT9P35527 623 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 KCNB1Q14721 858 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 IL17AQ16552 155 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 WHAMMP3Q1A5X7 153 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 C12orf60Q5U649 245 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 RCSD1Q6JBY9 416 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 CERS3Q8IU89 383 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 ZNF444Q8N0Y2 327 aaPredicted RBP7.86□□□□□ -1.15
TDP1-213ENST00000555880 ADSSL1Q8N142 457 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 DAGLBQ8NCG7 672 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 ANKS1AQ92625 1134 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 TRIM47Q96LD4 638 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 IRX2Q9BZI1 471 aaPredicted RBP7.86□□□□□ -1.15
TDP1-213ENST00000555880 THAP9Q9H5L6 903 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 ST7Q9NRC1 585 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 TCP11L1Q9NUJ3 509 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 LUC7L2Q9Y383 392 aaKnown RBP7.86□□□□□ -1.15
TDP1-213ENST00000555880 ROBO3Q96MS0 1386 aa7.86□□□□□ -1.15
TDP1-213ENST00000555880 A0A1W2PQC6 194 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 BICDL2A1A5D9 508 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 CTAGE15A4D2H0 777 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 LGALS16A8MUM7 142 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 POLR3GO15318 223 aaPredicted RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 COBLO75128 1261 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 EIF3JO75822 258 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 IPO7O95373 1038 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 TBC1D8O95759 1140 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 LDHCP07864 332 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 PARP1P09874 1014 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 USP17L8P0C7I0 530 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 CTAGE8P0CG41 777 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 PRPHP41219 470 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 PRCPP42785 496 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 SMC1AQ14683 1233 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 SLC4A8Q2Y0W8 1093 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 CTAGE6Q86UF2 777 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 FAM114A1Q8IWE2 563 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 CTAGE4Q8IX94 777 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 SLC35F6Q8N357 371 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 C4orf32Q8N8J7 132 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 EHBP1Q8NDI1 1231 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ACRBPQ8NEB7 543 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 OR8K1Q8NGG5 319 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 AK8Q96MA6 479 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 GBP3Q9H0R5 595 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ZSWIM4Q9H7M6 989 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ZNHIT6Q9NWK9 470 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 BARHL2Q9NY43 387 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 NARFQ9UHQ1 456 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 PUF60Q9UHX1 559 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 CCNL1Q9UK58 526 aaPredicted RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 MAPK8IP1Q9UQF2 711 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 GDAQ9Y2T3 454 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 OAS2P29728 719 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 PPP1R2P41236 205 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ERVK-24P63145 666 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 LONRF2Q1L5Z9 754 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 INF2Q27J81 1249 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 RC3H1Q5TC82 1133 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 KRT25Q7Z3Z0 450 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ZNF804AQ7Z570 1209 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 MB21D1Q8N884 522 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ZNF454Q8N9F8 522 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 RASGRP4Q8TDF6 673 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 HNRNPLLQ8WVV9 542 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 DHTKD1Q96HY7 919 aaPredicted RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 MTRQ99707 1265 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 SLF1Q9BQI6 1058 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 CCSER1Q9C0I3 900 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 EPC1Q9H2F5 836 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 EXOC1Q9NV70 894 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 SEC63Q9UGP8 760 aaKnown RBP7.85□□□□□ -1.15
TDP1-213ENST00000555880 MAD2L2Q9UI95 211 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms